ggKbase home page

ACD21_43_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
antitermination protein NusG similarity KEGG
DB: KEGG
73.0 174.0 272 1.20e-70 pmos:O165_026220
NUSG (db=PatternScan db_id=PS01014 from=172 to=181 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site) iprscan interpro
DB: PatternScan
null null null 0.0 pmos:O165_026220
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=17 to=189 evalue=5.5e-85 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
null null null 5.50e-85 pmos:O165_026220
no description (db=HMMSmart db_id=SM00738 from=14 to=123 evalue=1.4e-41 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: HMMSmart
null null null 1.40e-41 pmos:O165_026220
no description (db=Gene3D db_id=G3DSA:3.30.70.940 from=14 to=127 evalue=2.0e-38 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: Gene3D
null null null 2.00e-38 pmos:O165_026220
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=14 to=127 evalue=2.0e-36 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: superfamily
null null null 2.00e-36 pmos:O165_026220
NusG (db=HMMPfam db_id=PF02357 from=16 to=112 evalue=1.7e-24 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: HMMPfam
null null null 1.70e-24 pmos:O165_026220
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=132 to=189 evalue=4.5e-19 interpro_id=IPR008991 interpro_description=Translation protein SH3-like) iprscan interpro
DB: superfamily
null null null 4.50e-19 pmos:O165_026220
no description (db=Gene3D db_id=G3DSA:2.30.30.30 from=127 to=189 evalue=8.5e-19 interpro_id=IPR014722 interpro_description=Translation protein SH3-like, subgroup) iprscan interpro
DB: Gene3D
null null null 8.50e-19 pmos:O165_026220
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=165 to=181 evalue=1.1e-17 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.10e-17 pmos:O165_026220
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=147 to=162 evalue=1.1e-17 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.10e-17 pmos:O165_026220
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=69 to=81 evalue=1.1e-17 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.10e-17 pmos:O165_026220
KOW (db=HMMPfam db_id=PF00467 from=138 to=168 evalue=8.5e-07 interpro_id=IPR005824 interpro_description=KOW) iprscan interpro
DB: HMMPfam
null null null 8.50e-07 pmos:O165_026220
no description (db=HMMSmart db_id=SM00739 from=135 to=162 evalue=0.00038 interpro_id=IPR005824 interpro_description=KOW) iprscan interpro
DB: HMMSmart
null null null 3.80e-04 pmos:O165_026220
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bact UNIPROT
DB: UniProtKB
100.0 189.0 386 2.20e-104 K2DUE8_9BACT
Transcription termination/antitermination protein nusG n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGA6_9GAMM similarity UNIREF
DB: UNIREF90
73.1 null 273 6.00e-71 pmos:O165_026220