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rifcsplowo2_01_scaffold_1703

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1703_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1..516
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374D0F2
nitroreductase Tax=CG_Aenigma_01
nitroreductase
rifcsplowo2_01_scaffold_1703_2
Staphylococcus pettenkoferi, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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519..1106
-----------------
DNA (588bp)
protein (196aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=904314 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloc
superoxide dismutase, Fe-Mn family (EC:1.15.1.1)
Superoxide dismutase n=2 Tax=Staphylococcus pettenkoferi RepID=H0DIX4_9STAP
rifcsplowo2_01_scaffold_1703_3
unknown

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1193..1585
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_4
GWF2_OD1_45_11, Parcubacteria, Bacteria

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1620..2786
-----------------
DNA (1167bp)
protein (389aa)
Endo-1,4-beta-xylanase {ECO:0000313|EMBL:KKT90002.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
rifcsplowo2_01_scaffold_1703_5

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2852..3070
-----------------
DNA (219bp)
protein (73aa)
Marine sediment metagenome DNA, contig: S01H4_L02322 {ECO:0000313|EMBL:GAG68269.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein id=5048091 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_1703_6
unknown

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3171..3662
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_7
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3704..5416
-----------------
DNA (1713bp)
protein (571aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373434A
PepF/M3 family oligoendopeptidase
PepF/M3 family oligoendopeptidase {ECO:0000313|EMBL:AJM92145.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilu
rifcsplowo2_01_scaffold_1703_8
Candidatus Cloacimonas acidaminovorans, Candidatus Cloacimonas, Cloacimonetes, Bacteria

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5413..6057
-----------------
DNA (645bp)
protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
endonuclease III n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6CA7B
rifcsplowo2_01_scaffold_1703_9
unknown

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comp(6049..6423)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_10
CG_Woesearch_02, Woesearchaeota, Archaea

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6481..7089
-----------------
DNA (609bp)
protein (203aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=CG_Woesearch_02
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZL6_FERPA
rifcsplowo2_01_scaffold_1703_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7124..7417
-----------------
DNA (294bp)
protein (98aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidacea
Putative S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH01_9BACE
spermidine synthase
rifcsplowo2_01_scaffold_1703_12
unknown

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7519..7695
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7778..9661)
-----------------
DNA (1884bp)
protein (628aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
KH-domain/beta-lactamase-domain-containing protein; K07041 Tax=CG_Woesearch_02
kh-domain/beta-lactamase-domain-containing protein
rifcsplowo2_01_scaffold_1703_14

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comp(9681..10316)
-----------------
DNA (636bp)
protein (212aa)
proteasome subunit beta; K03433 proteasome beta subunit [EC:3.4.25.1] id=5047379 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta
rifcsplowo2_01_scaffold_1703_15
unknown

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comp(10404..10724)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_16
unknown

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comp(10702..10998)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_17
unknown

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11048..11383
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1703_18

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11424..11960
-----------------
DNA (537bp)
protein (179aa)
ASCG--DNA-directed--RNA--polymerase
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY id=5103653 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit E
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:AJF62934.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1703_19
unknown

Not on your lists

11957..12139
-----------------
DNA (183bp)
protein (61aa)
DNA-directed RNA polymerase, subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY id=5103654 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase, subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY Tax=AR20
DNA-directed RNA polymerase, subunit E
rifcsplowo2_01_scaffold_1703_20
unknown

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12136..12420
-----------------
DNA (285bp)
protein (95aa)
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY id=5103655 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY Tax=AR20
Ribosomal protein S24E
rifcsplowo2_01_scaffold_1703_21
unknown

Not on your lists

12392..12574
-----------------
DNA (183bp)
protein (61aa)
30S ribosomal protein S27ae n=3 Tax=Archaea RepID=K0INM2_NITGG id=5103656 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27ae n=3 Tax=Archaea RepID=K0INM2_NITGG Tax=AR20
30S ribosomal protein S27ae
rifcsplowo2_01_scaffold_1703_22
unknown

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12824..13546
-----------------
DNA (723bp)
protein (241aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY Tax=AR20
Chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_1703_23
CG_Woesearch_02, Woesearchaeota, Archaea

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13612..14337
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B3309
hypothetical protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_1703_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14399..15238)
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364EA5D
hypothetical protein; K07096 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_1703_25
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15235..16374)
-----------------
DNA (1140bp)
protein (380aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Pacearch_04
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_1703_26
AR15, Woesearchaeaota, DPANN, Archaea

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16734..16991
-----------------
DNA (258bp)
protein (86aa)
Ribosomal protein L35AE/L33A id=5800467 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L35AE/L33A Tax=AR15
50S ribosomal protein L35Ae
rifcsplowo2_01_scaffold_1703_27
unknown

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16993..17520
-----------------
DNA (528bp)
protein (176aa)
ASCG--Ribosomal--protein--L10e
50S ribosomal protein L10e n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DS36_METV3 id=5103619 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L10e n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DS36_METV3 Tax=AR20
50S ribosomal protein L10e
rifcsplowo2_01_scaffold_1703_28
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(17539..18141)
-----------------
DNA (603bp)
protein (201aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=CG_Woesearch_02
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E3R3_FLESM
rifcsplowo2_01_scaffold_1703_29
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

18184..18813
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein
id=5103829 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_1703_30
unknown

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18810..19844
-----------------
DNA (1035bp)
protein (345aa)
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST id=5103806 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST Tax=AR20
hypothetical protein
Displaying items 1-30 of 47 in total

View Taxonomy