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rifcsplowo2_01_scaffold_6332_17

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_35_20

near complete RP 36 / 55 MC: 6 BSCG 7 / 51 ASCG 33 / 38 MC: 2
Location: 11817..12230

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 139.0
  • Bit_score: 149
  • Evalue 1.80e-33
replication factor A1 similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 94.0
  • Bit_score: 96
  • Evalue 6.60e-18

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 414
ATGCAAGTAAAAGACCTAAAGCCAAAGCAGGGAAATGTTGACATTGTTGTTGATGTTGTTGATGTAGGCGATACTAGGGAATTTCAGAAATTCGGAAAGCCTGGAAAAGTTGCAACTGCAATAGCAAAAGACGAAACTGGCGACATAAAGCTTACATTATGGAATGAAGATATAGAAAAAGTCAATGCAGGCGACAAAGTGCATTTGACAAATGGATATGTCAATGAATGGCAGGGTGAAATGCAATTGACAACTGGAAGGCTTGGTAAGCTTGAGGTTGTCGGTAAAGCAGATGTTGATTTAAACAAAGAGCCTGACTCTAAAATAAGAACTAATATTCCAGCAGAAGAAAGCGATGAAGAAATTAATGTTGAGGAAGAAGATATTGAAGATAGTGGTGATGAAGAAATATAA
PROTEIN sequence
Length: 138
MQVKDLKPKQGNVDIVVDVVDVGDTREFQKFGKPGKVATAIAKDETGDIKLTLWNEDIEKVNAGDKVHLTNGYVNEWQGEMQLTTGRLGKLEVVGKADVDLNKEPDSKIRTNIPAEESDEEINVEEEDIEDSGDEEI*