ggKbase home page

rifcsplowo2_01_scaffold_7949_11

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_Archaea_34_35

partial RP 32 / 55 MC: 3 BSCG 8 / 51 ASCG 29 / 38 MC: 1
Location: 7485..8171

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 224.0
  • Bit_score: 271
  • Evalue 8.80e-70
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 224.0
  • Bit_score: 271
  • Evalue 1.20e-69
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 224.0
  • Bit_score: 264
  • Evalue 4.00e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 687
ATGGGATTAATAGTGCAAGACAAACAATTTGTAATACCAGGGGATGAATTAGCAACCGGGATTGATTACTTACCTGCGAATGGAGCTTATAGAGAAGATGACAAGATATATGCTGCTCAACTTGGATTGGTTAATATAAGCGGCAGGTTAATCAGAGTTGTTAATTTGAGCGGAAGATATATTCCGAAAGCTGGAGACAATGTTATAGGAAAGATAACAAACATAGGATTTAACGGCTGGATGGTTGATATTGGTTATGCTTATGAAGCAGCTTTGTCCTTGAAGGAAGCGACTTCTGATTTTATTGAAAGAGGATCTGACTTAACAAAATATTTTGATTTTGGCGAGGTTATTGTTGCAAAAATAGTTAATGTAACAAGATCAAAGATGATTGACTTATCAATGAAAGGGCCTGGATTAAGAAAGTTAAAGGGCGGAAAAATAATAGAGGTATCATCTTCTAAAGTTCCAAGAGTAATAGGAAAACAAGGAAGCATGATATCATTGATAAAAGAAGCAACAGGCTGCCAGATTACAGTTGGACAAAACGGCAAGGTTTGGATGTTGGGAAGCGATTTTAACAAAGAGATGCTTGCTGCTGCTGCAATATTAAAAATAGAGCAGGAAGCGCATACATCTGGATTGACTGAAAAGATTGATGTATTTTTAAGAGGCAGTATAAAATGA
PROTEIN sequence
Length: 229
MGLIVQDKQFVIPGDELATGIDYLPANGAYREDDKIYAAQLGLVNISGRLIRVVNLSGRYIPKAGDNVIGKITNIGFNGWMVDIGYAYEAALSLKEATSDFIERGSDLTKYFDFGEVIVAKIVNVTRSKMIDLSMKGPGLRKLKGGKIIEVSSSKVPRVIGKQGSMISLIKEATGCQITVGQNGKVWMLGSDFNKEMLAAAAILKIEQEAHTSGLTEKIDVFLRGSIK*