ggKbase home page

rifcsplowo2_01_scaffold_13340_23

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: comp(20566..20832)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 84.0
  • Bit_score: 54
  • Evalue 1.60e-05
DNA-directed RNA polymerase, subunit L n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TER4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 87.0
  • Bit_score: 72
  • Evalue 2.30e-10
DNA-directed RNA polymerase, subunit L {ECO:0000313|EMBL:EMR75052.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540 similarity UNIPROT
DB: UniProtKB
  • Identity: 35.6
  • Coverage: 87.0
  • Bit_score: 72
  • Evalue 3.30e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermoplasmatales archaeon SCGC AB-540-F20 → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 267
ATGGAGATGGAAGTAACAAAAAATGAAGATAAACAATTAGAGATAAGACTAAAGGATGTAGACGTTATAGTGCTTAAGTTAATTGTAGAAAAATTAAATGGAATCAAAGATGTTGAGTTTGCTGCGTGCACTGTTGAACATCCGCTTTTAGGAACTCAAAAGCTATTTGTAAAAACAAAAAAAGGCGAGCCTTCAAAATTAATAGAAAAAGTGATCGAAGAACTTAAGACAGAGGTAAACAAATTTTCAAGCAACTTTAAGAAATAG
PROTEIN sequence
Length: 89
MEMEVTKNEDKQLEIRLKDVDVIVLKLIVEKLNGIKDVEFAACTVEHPLLGTQKLFVKTKKGEPSKLIEKVIEELKTEVNKFSSNFKK*