ggKbase home page

rifcsplowo2_01_scaffold_31238_9

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 5312..6610

Top 3 Functional Annotations

Value Algorithm Source
nickel-dependent hydrogenase large subunit Tax=RBG_16_Micrarchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 432.0
  • Bit_score: 500
  • Evalue 1.80e-138
Nickel-dependent hydrogenase large subunit id=1889192 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 435.0
  • Bit_score: 473
  • Evalue 1.70e-130
hydrogenase/sulfur reductase, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 432.0
  • Bit_score: 467
  • Evalue 5.90e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Micrarchaeota_36_9_curated → Micrarchaeota → Archaea

Sequences

DNA sequence
Length: 1299
ATGCATAAAATAGATTTTGATATTAGTATTGAAAATTTAAGCAAAATTGAAGGCCATGCTGATTTAGATGTATCAGTCAAAGACGGTAAAGTTAAGGATATAAAATTAAGGATAACTGAAAATAAAAGGTTCTATACACAAGCAGTAAGAGGAAAACAGGCATCTTTAGTACATCAAATTGTTTCAAGAATATGTGGAACCTGCAGTGTTGCACATTTAACAGGATGTATTGAAACTGTTGAAAAGATTTATGAGATAAAACCATCTGAACAGACTCTTGCACTAAGAAATCTTTCTCTTTATGGTTTGAACATTAGAGATCATGCAATGCATCTTTACTTGTTCTGCCTTCCTGATATTTTTGGAAAGGATTCTGTGTTGGAATTTGAAGATTCAGGAAGAGAACATGAACTTTTACATAAGGCTTTTGATGTAAAATCAGCTGGAAATAAATTGGGGACAGTAGTTGGCGGAAGATCAGTTCATGCACCATACCCGACAATTGGTGGATTTACAAAAATCCCAAAACAAGAAGAACTAAAAGCACTGACACCAGAATTAAAAAAGGTAAGAGAAGATGCGCTTGAATTTGTAGAAATTTTTTATAACTGTAATTTTGAATTTATTGATCCAGATCCTGAATATACTGCATTAAAGAATGATGATTTTGGATATCTTGGAGATGTGATGTGTTCAACAAGAAAATATTGCATACCAGAAGAAGAATTTCTAAAATACCTAACAAAAAAGGTGATTCCGTATTCACAAGCAGAAGGATTCAAATTCGAAGAAAGGTCCTATCTTGTTGGAGCATTGGCAAGAATGAACCTTAATAAAGAAAGTCTTCACCCAGATACCAAAAAATCAGCAAAAAAATATTTGAGTACTTTTCCTTCAGATAATATTTTTCACAATAATCTTGCGCAGGCAATAGAAATAGTAAATTGCATTGATAGATCGATTGAGATAATAGACAAGCTTGAATTAAAGGAGGAAAAAAGACCAGGGTTAAAACTTGGCAAGAAAAGAGAGGATGTTGGGGTTATTGAAGCTCCTAGAGGAACTTTATATTATCACCTAAAAGTAAATGATGAAGCTAAAATTGAATATGCAAATTTAGTTATCCCAACTGCACAAAACCAAGTAGATATGGAAAAAAATATAGGGGGATTAGTACAAAAGAGACTTGATGAGGGGAAAACAAAGGAAGAAATAAGAAAGGAGATTGAAATGATAGTTAGGGCTTATGATCCATGCATGAGCTGTGCTACACACTTTCTGAAAATAAACTGGATATAA
PROTEIN sequence
Length: 433
MHKIDFDISIENLSKIEGHADLDVSVKDGKVKDIKLRITENKRFYTQAVRGKQASLVHQIVSRICGTCSVAHLTGCIETVEKIYEIKPSEQTLALRNLSLYGLNIRDHAMHLYLFCLPDIFGKDSVLEFEDSGREHELLHKAFDVKSAGNKLGTVVGGRSVHAPYPTIGGFTKIPKQEELKALTPELKKVREDALEFVEIFYNCNFEFIDPDPEYTALKNDDFGYLGDVMCSTRKYCIPEEEFLKYLTKKVIPYSQAEGFKFEERSYLVGALARMNLNKESLHPDTKKSAKKYLSTFPSDNIFHNNLAQAIEIVNCIDRSIEIIDKLELKEEKRPGLKLGKKREDVGVIEAPRGTLYYHLKVNDEAKIEYANLVIPTAQNQVDMEKNIGGLVQKRLDEGKTKEEIRKEIEMIVRAYDPCMSCATHFLKINWI*