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rifcsplowo2_01_scaffold_46053

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_46053_1
CG_Pacearch_06, Pacearchaeota, Archaea

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227..1933
-----------------
DNA (1707bp)
protein (569aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035CC481
Threonine-tRNA ligase
rifcsplowo2_01_scaffold_46053_2
unknown

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2022..3650
-----------------
DNA (1629bp)
protein (543aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B58424
Leucine rich repeat containing protein
rifcsplowo2_01_scaffold_46053_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3767..4129)
-----------------
DNA (363bp)
protein (121aa)
Probable ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4X0_9EURY id=5103339 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
putative ribonuclease VapC
rifcsplowo2_01_scaffold_46053_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4122..4346)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein id=4379348 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AbrB/MazE/MraZ-like Tax=AR10
rifcsplowo2_01_scaffold_46053_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(4423..4734)
-----------------
DNA (312bp)
protein (104aa)
Nucleotidyltransferase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYZ8_PYRAB
hypothetical protein; K07076 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
rifcsplowo2_01_scaffold_46053_6
AR17, Woesearchaeaota, DPANN, Archaea

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comp(4710..5087)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4H8_UNCMA
hypothetical protein Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_46053_7
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

5494..6225
-----------------
DNA (732bp)
protein (244aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_46053_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6448..7038
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein
id=5045765 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103355 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_46053_9
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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7022..7528
-----------------
DNA (507bp)
protein (169aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103413 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=GWA2_OD1_31_28_partial
rifcsplowo2_01_scaffold_46053_10
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

7530..9179
-----------------
DNA (1650bp)
protein (550aa)
sushi domain-containing protein / SCR repeat-containing protein (EC:2.7.8.17)
Putative uncharacterized protein Tax=AR13
hypothetical protein id=5048016 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_46053_11
unknown

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9163..9930
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46053_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10015..11343
-----------------
DNA (1329bp)
protein (443aa)
putative outer membrane adhesin-like protein Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying 12 items

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