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rifcsplowo2_01_scaffold_26382

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_26382_1
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(1..150)
-----------------
DNA (150bp)
protein (50aa)
id=5103053 Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_26382_2
CG_Pacearch_05, Pacearchaeota, Archaea

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231..413
-----------------
DNA (183bp)
protein (61aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_26382_3
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

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comp(414..668)
-----------------
DNA (255bp)
protein (85aa)
Putative pyrophosphatase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WRD3_9CYAN
pyrophosphatase Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
pyrophosphatase
rifcsplowo2_01_scaffold_26382_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(788..1372)
-----------------
DNA (585bp)
protein (195aa)
tRNA-intron endonuclease; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Pacearch_05
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5D0
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_26382_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1597..1818
-----------------
DNA (222bp)
protein (74aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_26382_6
CG_Pacearch_05, Pacearchaeota, Archaea

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1808..2104
-----------------
DNA (297bp)
protein (99aa)
DNA/RNA-binding protein Alba n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBZ0_NITGG
DNA/RNA-binding protein albA; K03622 archaea-specific DNA-binding protein Tax=CG_Pacearch_05
nucleoid protein Alba
rifcsplowo2_01_scaffold_26382_7
unknown

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comp(2118..2336)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26382_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2481..3104)
-----------------
DNA (624bp)
protein (208aa)
id=3688775 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_26382_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(3219..3575)
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00037F2D57
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Pacearch_05
histidine triad (HIT) protein
rifcsplowo2_01_scaffold_26382_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


comp(4195..6003)
-----------------
DNA (1809bp)
protein (603aa)
glycyl-tRNA synthetase, dimeric type; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=CG_Pacearch_03
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_26382_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

6284..6538
-----------------
DNA (255bp)
protein (85aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY id=5103084 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein Tax=CG_Pacearch_05
Like-Sm ribonucleoprotein core
rifcsplowo2_01_scaffold_26382_12
unknown

Not on your lists

6655..7026
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26382_13
CG_Pacearch_05, Pacearchaeota, Archaea

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7062..7736
-----------------
DNA (675bp)
protein (225aa)
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rnz; ribonuclease Z Rnz Tax=CG_Pacearch_05
RNAse Z
Displaying 13 items

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