ggKbase home page

rifcsplowo2_01_scaffold_39654_14

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_32_9

partial RP 26 / 55 MC: 2 BSCG 5 / 51 ASCG 17 / 38 MC: 1
Location: 7162..7839

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 224.0
  • Bit_score: 175
  • Evalue 8.50e-41
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 225.0
  • Bit_score: 289
  • Evalue 4.30e-75
Shwachman-Bodian-diamond syndrome protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 224.0
  • Bit_score: 166
  • Evalue 8.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_05 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 678
ATGACACAGGTACTTTCTCGAATAAAGGTTAATGGAAAGAATTTTGAAATAATAGTTGATGTTGATAAAGCAATTGCATTTAAGAAATCTGGAAGCGGAGATATTGGGAATATTTTAGAAATAGAGATGATTTACTCTGATTCTAAAAAAGGATTAAAAGCTGCTTCAAAGGACTTGATGGATGCTTTCAAGACAGAAGATACTTATGAAGTAGCTAAGAAGATAATCATGCAGGGAGAAGTGCAAATACCTGCGGAATACAGGGAAAAAGAAAAAGAAGGAAAAGCAAAACAAGTTATTGATTTTTTGATAAGAAATGCAGTTGACCCGAGGACAGACAGGCCTTATACAGCAGATAGAATTGAAAGGTCACTTGATGAAGCAGGAGTTAATATTTCAAATAAGCCAATTGATGCGCAGATGAAGGAGATAACAGATAAGCTTAGACTTGTATTACCCTTGAAAATACAGGTTAAAAAATTAAGAATTACTGTTCCTGCAATCCATACCGGACAAGCTTATGGATTCTTGACAAGCTATAAAGAATCAGAAGAATGGATGGGAAATGGAGACTTAAAATGCGTATGCAATGTTCCAATCGGGTTCCAGATGGAGTTTTATGATAAGTTAAATGCAATCACTCATGGAAGCGCAATAAGCGAGGAGATAAAAGATTAA
PROTEIN sequence
Length: 226
MTQVLSRIKVNGKNFEIIVDVDKAIAFKKSGSGDIGNILEIEMIYSDSKKGLKAASKDLMDAFKTEDTYEVAKKIIMQGEVQIPAEYREKEKEGKAKQVIDFLIRNAVDPRTDRPYTADRIERSLDEAGVNISNKPIDAQMKEITDKLRLVLPLKIQVKKLRITVPAIHTGQAYGFLTSYKESEEWMGNGDLKCVCNVPIGFQMEFYDKLNAITHGSAISEEIKD*