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rifcsplowo2_01_scaffold_48638_12

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(5398..5772)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8e n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS8E_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 123.0
  • Bit_score: 133
  • Evalue 2.00e-28
30S ribosomal protein S8e similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 123.0
  • Bit_score: 133
  • Evalue 5.70e-29

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Taxonomy

Thermococcus kodakarensis → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 375
ATGCAATCACAATGGCGTTCAAAGCGTAAACCATCCGGCGGCAGGTATCATCAGCCGTACAGGACAAAACGCAAGTTTGAGCTTGCACGCTTTCCCGCTAACACTGCTCTGAAAGAAACACAGCTCAAGAAAGTCCGTGTCCGTGGCGGCAATGTCAAGAACAGATTGCTTGCAGCAAACCAGGCAAATGTCGCAGTCGCAGGCAGCATCACAAAACTGAAAATTCTCAATGTTGTTGAGAATCCAGCAAACAAGTTTCTCGCGCGACGAAATATTCTAACTAAAGGCAGCATCATAGAAACAGAAAAAGGCAAAGCACGCATCACTTCCCGACCCGGACAAGATGGCGTTGTCAATGCGGTTTTGATAAAGTAA
PROTEIN sequence
Length: 125
MQSQWRSKRKPSGGRYHQPYRTKRKFELARFPANTALKETQLKKVRVRGGNVKNRLLAANQANVAVAGSITKLKILNVVENPANKFLARRNILTKGSIIETEKGKARITSRPGQDGVVNAVLIK*