ggKbase home page

rifcsplowo2_01_scaffold_16018_5

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_8

near complete RP 37 / 55 MC: 5 BSCG 7 / 51 ASCG 34 / 38 MC: 5
Location: comp(3376..5439)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO id=5103194 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 684.0
  • Bit_score: 1047
  • Evalue 0.0
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO Tax=AR20 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 682.0
  • Bit_score: 1047
  • Evalue 0.0
DNA topoisomerase 1 similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 682.0
  • Bit_score: 1047
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 2064
ATGTCAAAAATTTTGATTGTTTCTGAAAAACCACAATCGGCACTTAAAATAGCAACCGCTTTAGCAGATAAAGATGTTATTAAAAAACAAAATAAAAAGGTTCCTTATTATGAAATTACATATAAAGGAAATAAAATTATTGTTGGTTGTGCTGTCGGACATTTATTTGGATTAAAAGAAACCGATGGAAAAGGATGGACATACCCCGTATTTAATTATGATTGGATTCCAGCGTATGAAATTAATAAAGAAGCAAAATATACAAAAGATTATATTGATACTTTAAAAAAATTAGCGAAAGAAGCTAATGAATATTATAATTTTTGTGATGTTGATACGGAAGGAGAATTGATTTTTAGGAACATATTAAGATTCATATTTAAGAAAGAAAATGCAAAGAGGGCTTATTTCTCAACATTAACCAAAAAAGATTTAATTAAGGCATTCGAAGATGCTAAAGAAAGCATAAATTTTAAATTGGCAGATGCTGGTGAAGCTCGTCACAGTATGGATTTTTTGTTTGGAATCAATCTTAGTCGAGCATTAACATTATCATTAAAAAAAGCTCAAGGCGGATTTAAGGTATTATCTATTGGAAGAGTTCAAGGCCCGACTTTAAATTTAATTGTAAAAAAAGAAAAAGAGATTTTATTGTTTAAATCACAATTTTATTGGGAGATTTCTTTAACCGGCAAGGTGGATAATAAAGAAATAACCGCTTGGCATAAAAAAGGCCAATTTTGGAAAAAAGATGAAGCTGAAAAAACATTAAAAAATGTTCAAGGGAAAAAAGTAATTATTCAAGATATAAAAGAATCTGAGATTATTCAAGCACCACCCCCCCCATTTGATTTAACAACATTACAATTAGAATCTTATAGAAATTTTGGAATTAACCCTAAGGAAACTTTATCTCTAGCACAAAATTTATATGTTAATGGATTAATAAGTTACCCCAGAACAAGTTCACAGCAAATACCAAATTCTATTGATATTAAAGAAATTTTCACTAAATTAATCAATTCACAATATAAAGACATAGTTAAAGAATTATTAAAAACTAAATTAATTCCGAATAATGGTAAAAAAACAGACCCTGCTCATCCTGCTATTATTATTACAGGAGAGCTTCCAGAAAAATTAAATGAACGTGAATTTAAAATTTATGATTTGATTGCTAGAAGAACATTCGCAACATATGGAGAACCAGCTAAAAGAAAATCTTTAGTTGTTGAAATAAATTGCAATAAAGAAATTTTTATAGCAAAAGGCATAACAACAGTTTATTCAGGATGGCATAAATATTATCATCCTTACGTTAATTTGAAAGAAATTGAACTGCCTGAATTAAAGAAAGGACAAGAAATTAATAATCCTAAATTTGATTTATATGAAAAAGAAACACAGCCGCCAAAACGTTATACTCCAGCCTCATTAGTAAAAGAACTTGAGGAGAAAAATTTAGGAACTAAAGCAACGAGATCTAACATTATAGATACTTTATATGATCGACAATACGTTGCTGAACAAAGCATACAAGCTACTAATCTAGGCATAAAACTTATCGAAACTTTAGAAAAGCATTCTCCAGAAATAATTGATGAAAAATTAACAAGGCATTTTGAAAAAGAAACAGAGCAGATAGAGCAAGGCAAAAAATTAAAAGATAAAGTTATTGAAGAAAGTAAAAATGTTTTAGTTAAAATTCTTGAAAAATTTAAGAAAAATGAATTAAAGATTGGGGAAGAATTAGCAGAAGCAAATAAAGAAACAAGGGATAAGGCCAGCATAATTGGAAAATGTCCTAAATGCAATGAAGGAGATTTAAGAATCTTATATAATAGGAATAGTAAAAATTATTTCGTAGCTTGCAATAAATATCCTGAATGCAAAACAACATTTTCAATGCCAAAATATGCTTTACCGAAACCAAACGACATATGCAAGGAATGTAATTATCCTAGATTAAAAATGATTAGAAAAGGTAAAAGACCATATGATTTTTGCATTAATGTTGAATGCCCTTCTAGAAAAAGATATTTGGAAGAGCAAAATAAAATTTAA
PROTEIN sequence
Length: 688
MSKILIVSEKPQSALKIATALADKDVIKKQNKKVPYYEITYKGNKIIVGCAVGHLFGLKETDGKGWTYPVFNYDWIPAYEINKEAKYTKDYIDTLKKLAKEANEYYNFCDVDTEGELIFRNILRFIFKKENAKRAYFSTLTKKDLIKAFEDAKESINFKLADAGEARHSMDFLFGINLSRALTLSLKKAQGGFKVLSIGRVQGPTLNLIVKKEKEILLFKSQFYWEISLTGKVDNKEITAWHKKGQFWKKDEAEKTLKNVQGKKVIIQDIKESEIIQAPPPPFDLTTLQLESYRNFGINPKETLSLAQNLYVNGLISYPRTSSQQIPNSIDIKEIFTKLINSQYKDIVKELLKTKLIPNNGKKTDPAHPAIIITGELPEKLNEREFKIYDLIARRTFATYGEPAKRKSLVVEINCNKEIFIAKGITTVYSGWHKYYHPYVNLKEIELPELKKGQEINNPKFDLYEKETQPPKRYTPASLVKELEEKNLGTKATRSNIIDTLYDRQYVAEQSIQATNLGIKLIETLEKHSPEIIDEKLTRHFEKETEQIEQGKKLKDKVIEESKNVLVKILEKFKKNELKIGEELAEANKETRDKASIIGKCPKCNEGDLRILYNRNSKNYFVACNKYPECKTTFSMPKYALPKPNDICKECNYPRLKMIRKGKRPYDFCINVECPSRKRYLEEQNKI*