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rifcsplowo2_01_scaffold_21796

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21796_1

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comp(1..546)
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO44983.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_21796_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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598..948
-----------------
DNA (351bp)
protein (117aa)
toprim domain protein Tax=RBG_13_Woesearchaeota_36_6_curated
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
toprim domain protein
rifcsplowo2_01_scaffold_21796_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(934..1830)
-----------------
DNA (897bp)
protein (299aa)
heat shock protein HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_13_Woesearchaeota_36_6_curated
heat shock protein HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=16849708 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Protease HtpX-like protein
rifcsplowo2_01_scaffold_21796_4

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comp(1834..2397)
-----------------
DNA (564bp)
protein (188aa)
LemA family protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D774_METSW id=5103214 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LemA protein {ECO:0000313|EMBL:KHO50195.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
LemA family protein
rifcsplowo2_01_scaffold_21796_5

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2497..3339
-----------------
DNA (843bp)
protein (281aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
heat shock protein
rifcsplowo2_01_scaffold_21796_6
unknown

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comp(3336..4307)
-----------------
DNA (972bp)
protein (324aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21796_7

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comp(4347..4715)
-----------------
DNA (369bp)
protein (123aa)
PIN protein {ECO:0000313|EMBL:KHO50853.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
PIN protein
PIN domain-containing protein id=5241434 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_21796_8
AR13, Pacearchaeaota, DPANN, Archaea

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comp(4717..4923)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMF4_NITGG
Uncharacterized protein Tax=AR13
hypothetical protein
rifcsplowo2_01_scaffold_21796_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(4973..5308)
-----------------
DNA (336bp)
protein (112aa)
Mannose-6-phosphate isomerase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A4C4_THESM
mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ACS90469.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
rifcsplowo2_01_scaffold_21796_10
RLO_PLX_64_10, Bacteria

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comp(5335..6417)
-----------------
DNA (1083bp)
protein (361aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000362F420
vitamin-B12 independent methionine synthase
rifcsplowo2_01_scaffold_21796_11
RLO_PLX_64_10, Bacteria

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comp(6420..7142)
-----------------
DNA (723bp)
protein (241aa)
Predicted sugar nucleotidyltransferases n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5X8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_21796_12
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7181..8032)
-----------------
DNA (852bp)
protein (284aa)
Methyltransferase n=1 Tax=Streptomyces pulveraceus RepID=F5AMY4_9ACTO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJS63571.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.
methyltransferase
rifcsplowo2_01_scaffold_21796_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8245..8745)
-----------------
DNA (501bp)
protein (167aa)
Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_02
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase protein
Displaying 13 items

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