ggKbase home page

rifcsplowo2_01_scaffold_1209_22

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_10

near complete RP 33 / 55 MC: 6 BSCG 8 / 51 ASCG 33 / 38 MC: 4
Location: comp(15671..16216)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 181.0
  • Bit_score: 254
  • Evalue 9.50e-65
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 240
  • Evalue 1.00e-60
putative RNA-processing protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 172.0
  • Bit_score: 184
  • Evalue 2.40e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 546
ATGGTAGAGTATTCTTACGAATTGAAAGTTCCCAAAAACAGGGTGGCTGTCATTATAGGGAAGGAAGGCAGCGTCAAGAAAGACTTAGAGGAATCCACCAGCACAAAGCTGACAATAGATTCGAAAGAAGGGGATATATTTGTGTCGGGAGAAGATGCTCTTGGATTGTATACTGCAAGGGAAATAATAAGGGCTATAGGCAGGGGGTTTAATCCAGACATTGCCAAGCTGCTCTTAAAGCCTGATTATGTTTTTGAGATTGTTGATTTGAGGGAATACACAAAAAAATCAAAAGATGTCCTGCTAAGGCTCAAAGGAAGGGTTATCGGAAAAGAGGGCAAATCCCGAAGAATAATTGAAGAGCTTACAGAATGCGACATCTCTGTTTTCGGAAAAACCATAAGCATCATAGGCTTGCCTGAATCTGTCGCAATAGCCCGGCAGGCTATAGAGTCATTATTAAGGGGGTCTCCTCATGCAAATGTGTATAAATTCCTGGAAAGGAAAAGAAGAGATATGAAAAGAAGAGAGATACTGGAGATTTAA
PROTEIN sequence
Length: 182
MVEYSYELKVPKNRVAVIIGKEGSVKKDLEESTSTKLTIDSKEGDIFVSGEDALGLYTAREIIRAIGRGFNPDIAKLLLKPDYVFEIVDLREYTKKSKDVLLRLKGRVIGKEGKSRRIIEELTECDISVFGKTISIIGLPESVAIARQAIESLLRGSPHANVYKFLERKRRDMKRREILEI*