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rifcsplowo2_01_scaffold_28610

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_28610_1
unknown

Not on your lists

comp(48..449)
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28610_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(888..2351)
-----------------
DNA (1464bp)
protein (488aa)
AAA-4 family protein id=4797979 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
HMM--K03655
hypothetical protein
rifcsplowo2_01_scaffold_28610_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2851..3189
-----------------
DNA (339bp)
protein (113aa)
rifcsplowo2_01_scaffold_28610_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3205..3876
-----------------
DNA (672bp)
protein (224aa)
phosphoribosyl transferase domain protein, partial n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A5A68
phosphoribosyl transferase domain protein
HMM--K00777
rifcsplowo2_01_scaffold_28610_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3889..5322
-----------------
DNA (1434bp)
protein (478aa)
cardiolipin synthetase 2 (EC:2.7.8.-)
phospholipase D n=1 Tax=Schlesneria paludicola RepID=UPI00029A544B rbh
HMM--K06131
rifcsplowo2_01_scaffold_28610_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

5388..5705
-----------------
DNA (318bp)
protein (106aa)
id=4349156 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
rifcsplowo2_01_scaffold_28610_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(5713..6366)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C670
hypothetical protein
rifcsplowo2_01_scaffold_28610_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6373..7380
-----------------
DNA (1008bp)
protein (336aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366D473
Abortive infection protein
HMM--K07052
rifcsplowo2_01_scaffold_28610_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

7381..8619
-----------------
DNA (1239bp)
protein (413aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0Q5_ROSS1
hypothetical protein
HMM--K12349
rifcsplowo2_01_scaffold_28610_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

8619..9707
-----------------
DNA (1089bp)
protein (363aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBR9_9GAMM
tetratricopeptide repeat-containing protein
HMM--K15201
rifcsplowo2_01_scaffold_28610_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


9739..12294
-----------------
DNA (2556bp)
protein (852aa)
ASCG--Valyl-tRNA--synthetase
BSCG--tRNA--synthetase--Valyl
Valine--tRNA ligase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJ63_9FIRM
HMM--K01873
rifcsplowo2_01_scaffold_28610_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

12297..12680
-----------------
DNA (384bp)
protein (128aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDN4_DESTA
HMM--K03413
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
rifcsplowo2_01_scaffold_28610_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

12683..13534
-----------------
DNA (852bp)
protein (284aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E6I0_FLESM
HMM--K03179
4-hydroxybenzoate polyprenyltransferase
rifcsplowo2_01_scaffold_28610_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

13758..13985
-----------------
DNA (228bp)
protein (76aa)
Aromatic acid decarboxylase n=1 Tax=Pseudomonas putida CSV86 RepID=L1M2B1_PSEPU
HMM--K03186
aromatic acid decarboxylase
rifcsplowo2_01_scaffold_28610_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

14195..15802
-----------------
DNA (1608bp)
protein (536aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1P3_9BACT id=5223978 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
HMM--K03182
rifcsplowo2_01_scaffold_28610_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


comp(15806..16501)
-----------------
DNA (696bp)
protein (232aa)
BSCG--ribosomal--protein--L1
50S ribosomal protein L1 n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KEU1_ELUMP rbh
HMM--K02863
50S ribosomal protein L1
rifcsplowo2_01_scaffold_28610_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


comp(16503..16934)
-----------------
DNA (432bp)
protein (144aa)
BSCG--ribosomal--protein--L11
50S ribosomal protein L11 id=3804949 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
50S ribosomal protein L11
HMM--K02867
rifcsplowo2_01_scaffold_28610_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(16978..17541)
-----------------
DNA (564bp)
protein (188aa)
Transcription termination/antitermination protein NusG n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZN1_UNCTG
transcription antitermination factor NusG
HMM--K02601
rifcsplowo2_01_scaffold_28610_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(17529..17711)
-----------------
DNA (183bp)
protein (61aa)
Protein translocase subunit SecE n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZN0_UNCTG
protein translocase subunit SecE
HMM--K03073
rifcsplowo2_01_scaffold_28610_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(17719..18231)
-----------------
DNA (513bp)
protein (171aa)
rifcsplowo2_01_scaffold_28610_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18507..18626)
-----------------
DNA (120bp)
protein (40aa)
hypothetical protein, partial n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000365F52D
translation elongation factor TU
HMM--K02358
Displaying 21 items

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