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rifcsphigho2_02_scaffold_1331_13

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_28_36

near complete RP 37 / 55 MC: 3 BSCG 12 / 51 ASCG 36 / 38
Location: comp(9729..10325)

Top 3 Functional Annotations

Value Algorithm Source
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5044073 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 168
  • Evalue 9.10e-39
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 168
  • Evalue 1.30e-38
Transcription factor E similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 214.0
  • Bit_score: 162
  • Evalue 1.40e-37

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 597
ATGAATCTTATGGATAAGTATATTGAAGAAGCGATTATAGAATTAGTAGGAAAAGAAGGATTAAGTGTATATTTATTGTTAAAGAATAAGGAAAATTATAGTGAATTCTTATTAAGTGAAAAATTAAAAATAAATATTAATCAAATTAGAAATATACTTTATAAATTTGATTCTCAAAATTTAGTTTCATTTACAAGAAAAAAAGATAGAAAAAAGGGATGGTACATTTATTATTGGACATTTAGACATGATCAAATAAATGAATTAATAAAAAGAAAAAAATTGCATCAATTAAAAATAATTGATGAACAAATTATGAAAGAAAAAACTGTTATATATTACTCTTGTCCAAATAAATGTGTAAGAATGACAATAGAGGATGCGATGGAATATGCTTTTGTATGTCCAGAATGTGGAAGTATATTTAATCCAGATGATAGTTCTAAAAGAATGCAAAAATTAAATGAAGAAAAAAAAGAAATTCAGGAATTATTAGATAATTTTGAAAAAGCAAAAATAAAAGCTATACCTGTAAAAACTAAAAAAAATCTCAAGAAGAAAAAAACAGTTAAAAAGAAGAAAAAGTCAAGAAAATAA
PROTEIN sequence
Length: 199
MNLMDKYIEEAIIELVGKEGLSVYLLLKNKENYSEFLLSEKLKININQIRNILYKFDSQNLVSFTRKKDRKKGWYIYYWTFRHDQINELIKRKKLHQLKIIDEQIMKEKTVIYYSCPNKCVRMTIEDAMEYAFVCPECGSIFNPDDSSKRMQKLNEEKKEIQELLDNFEKAKIKAIPVKTKKNLKKKKTVKKKKKSRK*