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rifcsphigho2_02_scaffold_2697_24

Organism: RIFCSPHIGHO2_02_FULL_Aenigmarchaeota_36_49

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38
Location: 26404..27234

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002EE734D similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 214.0
  • Bit_score: 68
  • Evalue 1.10e-08
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:KHF30036.1}; TaxID=1548750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. BCO1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 214.0
  • Bit_score: 68
  • Evalue 1.50e-08

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Notes

really partial sequence, bad hit values in NCBI_not validated Cindy Castelle (5/11/17)

Taxonomy

Anoxybacillus sp. BCO1 → Anoxybacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 831
ATGTTTGGACCATCTATACAAGTAGCAGTGAATGTACCAGTATCACCATTGCAGCCGAGAATAGCAACACCTCTCATTGGGCTATCTCCTTTTGAGCTTGAAGCTTTGCTTGAACAAAATCTGGACAGCATAGAAGATTTTTATGACGCTGACCCATTCTATCAGGATATGCATCCTGCTGATGCAAGAGCCAATTATTATAACAATCCTGAATTTGTAAAAAGGTGCAGAGCATTGAAAGGCAGAATTCCTGCATCAGTTTATTTGTCTGAACCTCAGATTTTTGTAAGAGAAGAACCCGGAAATCATTACTCAGCTGAATATAATTCAGAACTGAACAGGAGGCTTGATACTTTACTTTCCCAATATAAAAGAACAGGTGGCAAAGATAGACCTCCGCCAGGCAAAATATTCACAAAACGTTTCAGAAAGGAAAGAGAATGGATCGTTGAACAGCAATTACATATTGTCCAATATTTATGTGAGAAGCAGCATAGATATTTGGAAACCAATGCTCTGATTGATTTGCAGTATATAACACAACACGATATTGGTGATAATATCGATTATTCAAATTCAACAGTTTCGCGGCTGATGAATAATTTAACTATTCAGCTGCCGGATGGAAAAATAATATTCGCCGAAGAATTAACTCCTGACAAGAACTTTCTTAGAACAAACGCCCTGAAATATCTTCAGCAGGATCCGCAATGCTATGAAAATGGAAAATGGAAAGTATCGGATAGAAAATTGAGAGATATTCTTGAACAAAAATTTGGGTTTGATATCTCGCGGAGAACAGTTGCATATTACAGAAATATGATATCATAA
PROTEIN sequence
Length: 277
MFGPSIQVAVNVPVSPLQPRIATPLIGLSPFELEALLEQNLDSIEDFYDADPFYQDMHPADARANYYNNPEFVKRCRALKGRIPASVYLSEPQIFVREEPGNHYSAEYNSELNRRLDTLLSQYKRTGGKDRPPPGKIFTKRFRKEREWIVEQQLHIVQYLCEKQHRYLETNALIDLQYITQHDIGDNIDYSNSTVSRLMNNLTIQLPDGKIIFAEELTPDKNFLRTNALKYLQQDPQCYENGKWKVSDRKLRDILEQKFGFDISRRTVAYYRNMIS*