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rifcsphigho2_02_scaffold_21998_1

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: 2..913

Top 3 Functional Annotations

Value Algorithm Source
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 293.0
  • Bit_score: 431
  • Evalue 7.30e-118
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 300.0
  • Bit_score: 387
  • Evalue 1.50e-104
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 299.0
  • Bit_score: 356
  • Evalue 6.00e-96

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_46_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 912
TTAGGCTGCAGGCCAGAAGAAAGAGCAACAGAAGAAATAATAAACTACGGCATTGTTAATATAAACAAATGCCAGGGCCCAACTTCTCATCAGGTAAGCGATTATGTGCAGAAAATTTTGGGTATTAAAAAATCAGGCCATTCAGGGACTCTTGATCCAAATGTTCATGGGCTATTGCCAGTTGCATTGGGCAGGGCAACAAGAATTGTGCAGGGATTGCTTAAATCTGGAAAAGAATATGTGGGCATAATGCATTTGCATAAAGATGTTGGAGAAACAAAATTAAAAGAGGCAATAAAAAATAATTTTACCGGAAAAATAAAGCAAATTCCCCCTTTGAAAAGCGCTGTCAAAAGGGTAAAGCGGGAAAGGGAAATTTATTATTTTGAAATTCTTGAAAAAGATGGCCAAGATGTTTTGTTTATTGTCGGATGCGAGGCAGGGACTTACATAAGAAAATTGATTCATGATCTGGGGCAGAAATTAAAAATTGGAGCGCATATGCTGGAGCTTAGAAGGACAAAAGCAGGCCCGTTTGATGAAAAAACATTATTCACATTGCAGGATTTAACTGATGCATTTTATTTTTATAAAAATGAGAAAAATGACAAATTCCTGAGGAAAATCATACAGCCAGTGGAAAATGCTATTACACATCAGCCTAAAATATGGGTTTTTGACACAACTGTTGACACTTTATGCCATGGCGCAGACTTAAACATTCCAGGGATAAGCAAATTAAACGACCAAATAAATAAAAATGACATAGTTGCAATCATGACGCTGAAAGAAGAATTAGTTGCATTGGGAACTGCGCAACTGGCTTCTGAAGAAATAATGGAAAAAGAAAAAGGTATGGCAGTCAAGACAGAGAGGGTTTTTATGGTGCCTGGAACTTATAAAGTTGTTTGA
PROTEIN sequence
Length: 304
LGCRPEERATEEIINYGIVNINKCQGPTSHQVSDYVQKILGIKKSGHSGTLDPNVHGLLPVALGRATRIVQGLLKSGKEYVGIMHLHKDVGETKLKEAIKNNFTGKIKQIPPLKSAVKRVKREREIYYFEILEKDGQDVLFIVGCEAGTYIRKLIHDLGQKLKIGAHMLELRRTKAGPFDEKTLFTLQDLTDAFYFYKNEKNDKFLRKIIQPVENAITHQPKIWVFDTTVDTLCHGADLNIPGISKLNDQINKNDIVAIMTLKEELVALGTAQLASEEIMEKEKGMAVKTERVFMVPGTYKVV*