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rifcsphigho2_02_scaffold_21998_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(8842..9537)

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 232.0
  • Bit_score: 307
  • Evalue 1.10e-80
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 232.0
  • Bit_score: 307
  • Evalue 1.60e-80
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 228.0
  • Bit_score: 239
  • Evalue 8.10e-61

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 696
ATGAGCGAAATTAATGTAAAAGACAAAGACATTGTAGTTCCAGGAGAAATATTAGCCGTGGGAATGGACAGCTTCCCAGGAATAGGAACTTACAGGGAAGGAGAGAATATAATTGCTGCGCAATTAGGGCTGGTGCAGATGGAAGGAAGAACTATAAAACTCATACCTTTGTCTGGAAGGTATATTCCAAAAAAATATGACACGATTATATGCGAGGTTATTGACGTAAATTTCAGCGGCTGGCGCCTGGATACCCACAGCCCTTATTCAGCTATGCTTTCCATGAAAGAAGCTACTTCCCAGTTTATAGCTAGAGGAGCAGACCTTACAAAATTCTATGGCATAGGTGATTATTTATCATGCAAAATAGTTAATGTCACAAGCCAGAAGCTTGTTGATGTTACAATGAAAGGCATGGGTTTGCAAAAATTAAAAGGCGGAAGAATAATCAGTGTTGCAAGCAACAAAGTTCCAAGGATAGTGGGCAAGGAAGGAAGCATGGTATCTATGATAAAGCAGGAGACAAATTGCAGCATTCTGGTTGGGCAGAACGGCCTTATATGGATTAATGGAACCCCTGAAGGTGAATTGCTCACAGTTGCTAGCATAAGGAAAATTGAGGAAGAAAGCCATTTATCTGGCTTGACTGATAAAATCAAGGAGTTTTTGGAGAACAATAAGCCAAAAGCACAATAA
PROTEIN sequence
Length: 232
MSEINVKDKDIVVPGEILAVGMDSFPGIGTYREGENIIAAQLGLVQMEGRTIKLIPLSGRYIPKKYDTIICEVIDVNFSGWRLDTHSPYSAMLSMKEATSQFIARGADLTKFYGIGDYLSCKIVNVTSQKLVDVTMKGMGLQKLKGGRIISVASNKVPRIVGKEGSMVSMIKQETNCSILVGQNGLIWINGTPEGELLTVASIRKIEEESHLSGLTDKIKEFLENNKPKAQ*