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rifcsphigho2_02_scaffold_1138_2

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_62_20

near complete RP 35 / 55 MC: 6 BSCG 12 / 51 ASCG 36 / 38 MC: 1
Location: comp(2300..2920)

Top 3 Functional Annotations

Value Algorithm Source
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 296
  • Evalue 1.80e-77
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 296
  • Evalue 2.50e-77
TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 174.0
  • Bit_score: 248
  • Evalue 2.00e-63

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 621
ATGGCTACTCGCAAAGGGGGAAAGAAAGTGCAGAAGACCGCGGCAGTGCAGAAGGCCCAGCCAGTGCAGAAGGCTCAGCAGAGAGCGGTCGAGATAACCGTTGTCAATATCGTGGTCTCCACCGCCCTCGAGGAGGACATCCCGCTCGAGAAGATGGCGGCGACCCTGCCGAACACCGAGTACAACCCCGAGCAGTTCCCCGGGCTGGTCATCCGCATCAAGGAACCCAAGACAAGCGCTCTCATCTTCAGCTCGGGCAAGGTGGTATGCACCGGCGCGAGGTCCATGGAGAAAGTGGAGGAGAGCATCGGCCAGATCATCAAGGCCCTGGAGAAAATCAACATCAAGGTCAAGATCAAGCCGATCATCAAGATTCAGAACATCGTCGCGTCCGGCAGCGTGGGGATGGACCTCAACCTCAACACCCTGGCCATGAAGCTCCGCAACACCGAGTACGAGCCGGAGCAGTTCCCCGGCCTGGTGTACAAGCTGCTTGAGGCCAAGGCGACCTTCCTCCTGTTCAGCAACGGCAAGGTCGTGTGCACCGGGACCAAGAGCGAGGAAGAGGTGCACCGGGCCCTGGACATGCTCATCGTCAACCTGAAGAAGGTCATGAAGTAG
PROTEIN sequence
Length: 207
MATRKGGKKVQKTAAVQKAQPVQKAQQRAVEITVVNIVVSTALEEDIPLEKMAATLPNTEYNPEQFPGLVIRIKEPKTSALIFSSGKVVCTGARSMEKVEESIGQIIKALEKINIKVKIKPIIKIQNIVASGSVGMDLNLNTLAMKLRNTEYEPEQFPGLVYKLLEAKATFLLFSNGKVVCTGTKSEEEVHRALDMLIVNLKKVMK*