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rifcsphigho2_02_scaffold_5889_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_62_20

near complete RP 35 / 55 MC: 6 BSCG 12 / 51 ASCG 36 / 38 MC: 1
Location: 8931..9905

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 321.0
  • Bit_score: 384
  • Evalue 1.40e-103
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 321.0
  • Bit_score: 384
  • Evalue 1.00e-103
H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 325.0
  • Bit_score: 356
  • Evalue 8.40e-96

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Taxonomy

archaeon GW2011_AR15 → Archaea

Sequences

DNA sequence
Length: 975
ATGCTGCCCTATGAGAAAGTCCGCAGGGAGCGTCTCGTCAAGACCGCGGCAGAAAGCGACCCCCGTTTCGGCTGCAGGCCGGAAGAGCGTCCGGCAGCGCAGCTGCTCGACTACGGCATCGTCAACATCGACAAGCCCGAAGGACCGACGTCCCATCAGGTCGCGGACTACGCGAAGCGCATCATCGGCGCGAAGAAGGCCGGCCATTCCGGCACCCTGGACCCGGGCGTCACCGGCGTTCTGCCGGTCGCGATGGGGCGCGCGACGAGGATTGTCCAGCTCCTCCTCACCGCGGGGAAGGAATATGTCGCAGTGATGCATGTTCACGATGCGGTGCCGGAGCAGCAGCTCCGCGCCACGCTCCGCCGTTTCGAGGGAAGGATTGAGCAGCTCCCTCCGGTGCGGAGCGCGGTCAAGCGGGCGCTGCGCGTCCGCAGCGTCTATCATCTTGAGGTGTTGGAGATTGCGGAGCGCGACGTGCTCTTCACCGCGAGCGTCGAAGCCGGCACGTATATCCGCAAGCTCATCCACGACATCGGCCGCGAGCTGCGCTGCGGTGCCCACATGGCGGATTTGCGCAGGACGCGGGCCGGGCCCTTCACCGAGGAGAGCCTGGTGACGCTGCAGGACTTCGCTGATGCGGTGCACTACTTCCGCGACGGCAACGACAAGATGCTCCTGCGCTGCATGCAGCCGGTTGAACGCGCCGTGGAGCACCTGCCGAAGGTGTGGGTCCTGGACGCCGCAGTGGAGACGCTGTGCCACGGGTCTGACCTCTTCCTGCCCGGCATCTCGGCGTTCCATTCGGGAATTGTCGCGGGCGATACCGTCGCGCTGATGACCCTGAAGGAGGAGCTTATCGGCTACGGCACGGCGCGATGCACCTCGGGCGAGATGGTCGCGCCGCACGGTCTTGCGGTGAAGAGCGAGAAGATATTCATGCTTCCCGGGACGTACCCGAAAGCGACGGCTTGA
PROTEIN sequence
Length: 325
MLPYEKVRRERLVKTAAESDPRFGCRPEERPAAQLLDYGIVNIDKPEGPTSHQVADYAKRIIGAKKAGHSGTLDPGVTGVLPVAMGRATRIVQLLLTAGKEYVAVMHVHDAVPEQQLRATLRRFEGRIEQLPPVRSAVKRALRVRSVYHLEVLEIAERDVLFTASVEAGTYIRKLIHDIGRELRCGAHMADLRRTRAGPFTEESLVTLQDFADAVHYFRDGNDKMLLRCMQPVERAVEHLPKVWVLDAAVETLCHGSDLFLPGISAFHSGIVAGDTVALMTLKEELIGYGTARCTSGEMVAPHGLAVKSEKIFMLPGTYPKATA*