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bjp_ig2157_scaffold_443_24

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 24897..25856

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor id=5082350 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 624
  • Evalue 4.40e-176
  • rbh
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 624
  • Evalue 6.20e-176
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 318.0
  • Bit_score: 498
  • Evalue 1.30e-138

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGACCACTGCACTACTTGCACCCACCGCCCTGCCGTCCGCCACACTGGCCGTGGCCAGCCCGTGGGCGAGCCGTTCGCTGACGCTGCCCGCGCTGGGCAACCTGGACGCCTACATTTCGGCCGTCAACCGCATGCCGCTGTTGACGCTGGAAGAGGAACAGGGCGCTGCGCGCCGCCTGCGCGACCACAACGATATCGACGCTGCCGGGCAGCTGGTGATGTCGCACCTGCGGCTGGTGGTGTCGATCGCCCGCCAGTACCTGGGTTATGGCCTGCCGCACGGCGACCTGATCCAGGAGGGCAACGTCGGCCTGATGAAAGCGGTCAAGCGCTTCGATCCCGAACAGGGCGTGCGCTTGGTGAGCTACGCCATGCACTGGATCAAGGCTGAGATCCACGAGTACATCCTGAAGAACTGGCGTATGGTCAAGGTGGCGACCACCAAGGCCCAGCGCAAGCTGTTTTTCAACCTGCGCTCGATGAAACAGGGCTTCCGTGCCGAAGCGCTGGACGGCGACACGCACCGTGAAGCGTTTTCGGATGGCGAAGTGGACTTGGTCGCTCGCGACCTGAAGGTCAAGCCGGAAGAAGTGCGCGAAATGGAAACACGGCTTTCCGGCGGCGACGTGGTGCTGGACCCGAGCCCGGGCGATGACGGTGAAGACAGCTTCGGTCCCATTGCCTTCCTGGCCGACGCGACGCACGAACCCACGGCAATGATCGAGTCGGCGCAGCGCGACGTGCTGGCCACCGAAGGCATCGCCACCGCCATGAGCGAGCTCGACGACCGTTCGCGCCGCATCGTGACCGAGCGCTGGCTCAAGGTGAACGATGACGGCTCGGGCGGCATGACGCTGCACGAACTGGCGGCCGAATACGGTGTGAGCGCCGAGCGCGTGCGCCAGATCGAGGTCGCGGCCATGAAGAAGATGCGCAAGGCGCTGGCCGCTTTCGCCTGA
PROTEIN sequence
Length: 320
MTTALLAPTALPSATLAVASPWASRSLTLPALGNLDAYISAVNRMPLLTLEEEQGAARRLRDHNDIDAAGQLVMSHLRLVVSIARQYLGYGLPHGDLIQEGNVGLMKAVKRFDPEQGVRLVSYAMHWIKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFRAEALDGDTHREAFSDGEVDLVARDLKVKPEEVREMETRLSGGDVVLDPSPGDDGEDSFGPIAFLADATHEPTAMIESAQRDVLATEGIATAMSELDDRSRRIVTERWLKVNDDGSGGMTLHELAAEYGVSAERVRQIEVAAMKKMRKALAAFA*