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rifcsphigho2_02_scaffold_1964

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1964_1
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3..536)
-----------------
DNA (534bp)
protein (178aa)
seg id=5041711 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_02_scaffold_1964_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

887..2356
-----------------
DNA (1470bp)
protein (490aa)
MarR family transcriptional regulator Tax=AR9
putative signal transduction protein id=5041712 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_1964_3

Not on your lists

2630..3112
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein id=5041714 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:AJF61748.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
CopG family transcriptional regulator
rifcsphigho2_02_scaffold_1964_4

Not on your lists

3122..3817
-----------------
DNA (696bp)
protein (232aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO50907.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DSBA oxidoreductase
rifcsphigho2_02_scaffold_1964_5
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3819..4376
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein id=4067271 bin=GWF2_Bacteroidetes_41_61 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
polyferredoxin
rifcsphigho2_02_scaffold_1964_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

4420..5244
-----------------
DNA (825bp)
protein (275aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI000379D343
Copper binding protein, plastocyanin/azurin family Tax=AR6
rifcsphigho2_02_scaffold_1964_7
GWC2_OD1_38_7, Parcubacteria, Bacteria

Not on your lists

5279..6607
-----------------
DNA (1329bp)
protein (443aa)
(Fe-S)-binding protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003777F43
Dissimilatory sulfite reductase (Desulfoviridin), alpha/beta subunit Tax=GWC2_OD1_38_7
dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit
rifcsphigho2_02_scaffold_1964_8
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

6609..7055
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR10_9CHLB
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
hypothetical protein
rifcsphigho2_02_scaffold_1964_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

7083..7388
-----------------
DNA (306bp)
protein (102aa)
Transcriptional regulator, ArsR family id=5800400 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcriptional regulator, ArsR family Tax=AR15
rifcsphigho2_02_scaffold_1964_10
AR9, Woesearchaeaota, DPANN, Archaea

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7391..7759
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_02_scaffold_1964_11

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8026..8202
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49668.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsphigho2_02_scaffold_1964_12
R_WOR_1_53_15, WOR-1, Bacteria

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8196..10826
-----------------
DNA (2631bp)
protein (877aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4)
copper-translocating P-type ATPase Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1964_13
unknown

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10834..10926
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_14
unknown

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10944..11171
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_15
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

11290..11490
-----------------
DNA (201bp)
protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1964_16
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

11631..11861
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363B5ED
hypothetical protein Tax=RIFOXYD1_FULL_OD1_48_21_curated
rifcsphigho2_02_scaffold_1964_17
unknown

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12113..12346
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_18
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12407..12730
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein
rifcsphigho2_02_scaffold_1964_19
unknown

Not on your lists

12748..12900
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_20

Not on your lists

12906..13154
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR55_METAC
Uncharacterized protein {ECO:0000313|EMBL:KHO53734.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsphigho2_02_scaffold_1964_21
unknown

Not on your lists

13529..13627
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_22

Not on your lists

13640..14125
-----------------
DNA (486bp)
protein (162aa)
DoxX family protein id=5800422 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DoxX family protein {ECO:0000313|EMBL:AJF61753.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
DoxX family protein
rifcsphigho2_02_scaffold_1964_23

Not on your lists

14122..14961
-----------------
DNA (840bp)
protein (280aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3BNW2_POLPA
Uncharacterized protein {ECO:0000313|EMBL:KHO51062.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
vitamin K epoxide reductase
rifcsphigho2_02_scaffold_1964_24

Not on your lists

14951..15658
-----------------
DNA (708bp)
protein (236aa)
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:KHO51024.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
rifcsphigho2_02_scaffold_1964_25
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(15824..16414)
-----------------
DNA (591bp)
protein (197aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQC3_9BACT
hypothetical protein
rifcsphigho2_02_scaffold_1964_26
unknown

Not on your lists

comp(16432..16737)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_27
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16935..17561)
-----------------
DNA (627bp)
protein (209aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBS2_HALHC
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidac
rifcsphigho2_02_scaffold_1964_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17764..19671
-----------------
DNA (1908bp)
protein (636aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=CG_Woesearch_02
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] id=5048090 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_1964_29
unknown

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19840..20223
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1964_30
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(20235..20921)
-----------------
DNA (687bp)
protein (229aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying items 1-30 of 56 in total

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