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rifcsphigho2_02_scaffold_2503

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2503_1
unknown

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comp(1..537)
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_2

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849..1586
-----------------
DNA (738bp)
protein (246aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_02_scaffold_2503_3

Not on your lists


1583..2428
-----------------
DNA (846bp)
protein (282aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rplP0; 50S ribosomal protein L10
rifcsphigho2_02_scaffold_2503_4
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2668..2994
-----------------
DNA (327bp)
protein (109aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
50S ribosomal protein L12
rifcsphigho2_02_scaffold_2503_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3039..3929
-----------------
DNA (891bp)
protein (297aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
hypothetical protein id=5047527 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_2503_6

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comp(4015..4191)
-----------------
DNA (177bp)
protein (59aa)
30S ribosomal protein S27; K02977 small subunit ribosomal protein S27Ae id=5049219 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S27ae
rifcsphigho2_02_scaffold_2503_7
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4370..4744)
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rifcsphigho2_02_scaffold_2503_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(4746..5336)
-----------------
DNA (591bp)
protein (197aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_2503_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5498..5908)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5800439 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_2503_10
unknown

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comp(5905..6744)
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_11
unknown

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comp(6714..7556)
-----------------
DNA (843bp)
protein (281aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_12

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7684..8901
-----------------
DNA (1218bp)
protein (406aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsphigho2_02_scaffold_2503_13
unknown

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comp(9030..9380)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_14

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9814..10791
-----------------
DNA (978bp)
protein (326aa)
Putative uncharacterized protein id=5800161 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61492.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2503_15

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11124..11462
-----------------
DNA (339bp)
protein (113aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97907.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsphigho2_02_scaffold_2503_16
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(11800..12330)
-----------------
DNA (531bp)
protein (177aa)
Trichohyalin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FV34_TRIVA
trichohyalin
Trichohyalin, putative {ECO:0000313|EMBL:EAX91231.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
rifcsphigho2_02_scaffold_2503_17
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12403..13017)
-----------------
DNA (615bp)
protein (205aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=CG_Woesearch_02
Protein-L-isoaspartate O-methyltransferase
Protein-L-isoaspartate O-methyltransferase 2 id=3846092 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
rifcsphigho2_02_scaffold_2503_18
AR15, Woesearchaeaota, DPANN, Archaea

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comp(13014..13979)
-----------------
DNA (966bp)
protein (322aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative RNA methylase Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_2503_19
unknown

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14053..14424
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_20
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(14425..14988)
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
rifcsphigho2_02_scaffold_2503_21
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

15106..15414
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rifcsphigho2_02_scaffold_2503_22
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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15494..16234
-----------------
DNA (741bp)
protein (247aa)
Nucleoside-diphosphate-sugar pyrophosphorylase family protein id=18312825 bin=Haloredivivus tax=Haloredivivus
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EHK01186.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain
mannose-1-phosphate guanylyltransferase
rifcsphigho2_02_scaffold_2503_23
unknown

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comp(16380..16766)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2503_24

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comp(16791..17543)
-----------------
DNA (753bp)
protein (251aa)
transcriptional regulator TrmB id=5045774 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO54441.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_2503_25
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

17652..18293
-----------------
DNA (642bp)
protein (214aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D1N4_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17837.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
rifcsphigho2_02_scaffold_2503_26
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

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18308..19816
-----------------
DNA (1509bp)
protein (503aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
rifcsphigho2_02_scaffold_2503_27
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

19820..20878
-----------------
DNA (1059bp)
protein (353aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5043939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2503_28
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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20882..21982
-----------------
DNA (1101bp)
protein (367aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Phosphoenolpyruvate synthase id=4968552 bin=GWA2_CPR4_42_17 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
rifcsphigho2_02_scaffold_2503_29
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(21983..22678)
-----------------
DNA (696bp)
protein (232aa)
TrmH family RNA methyltransferase, group 1 Tax=CG_Woesearch_01
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA:Cm32/Um32 methyltransferase
rifcsphigho2_02_scaffold_2503_30
unknown

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comp(22718..23467)
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

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