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rifcsphigho2_02_scaffold_5279

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5279_1

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comp(2..769)
-----------------
DNA (768bp)
protein (256aa)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA id=5103608 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase, NOL1/NOP2/sun family
RNA methylase, NOL1/NOP2/sun family {ECO:0000313|EMBL:AJF62889.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_5279_2

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comp(872..1915)
-----------------
DNA (1044bp)
protein (348aa)
Marine sediment metagenome DNA, contig: S01H1_L00173 {ECO:0000313|EMBL:GAF79503.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_5279_3
unknown

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comp(2085..3206)
-----------------
DNA (1122bp)
protein (374aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_trna_2
unknown

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comp(3415..3515)
-----------------
DNA (101bp)
transferRNA
rifcsphigho2_02_scaffold_5279_trna_1
unknown

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comp(3524..3615)
-----------------
DNA (92bp)
transferRNA
rifcsphigho2_02_scaffold_5279_4
AR20, Woesearchaeaota, DPANN, Archaea

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3945..4646
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein
id=5103614 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_5279_5
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

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comp(4663..7863)
-----------------
DNA (3201bp)
protein (1067aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RRM0_9PLAN
rifcsphigho2_02_scaffold_5279_6
unknown

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comp(7885..8406)
-----------------
DNA (522bp)
protein (174aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM Tax=AR20
Transcriptional repressor NrdR
rifcsphigho2_02_scaffold_5279_7
GWA2_OD1_56_7_partial, Parcubacteria, Bacteria

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8559..8999
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein PspoU_07025 Tax=GWA2_OD1_56_7_partial
rifcsphigho2_02_scaffold_5279_8
unknown

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9092..9949
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_9
unknown

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9980..11833
-----------------
DNA (1854bp)
protein (618aa)
Minimal nucleotidyltransferase fused to HEPN domain n=1 Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH id=5103615 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Minimal nucleotidyltransferase fused to HEPN domain n=1 Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH Tax=AR20
Minimal nucleotidyltransferase fused to HEPN protein
rifcsphigho2_02_scaffold_5279_10
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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comp(11830..12519)
-----------------
DNA (690bp)
protein (230aa)
ATP-NAD/AcoX kinase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9R6_9BACT id=35842 bin=ACD30 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ07536.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
rifcsphigho2_02_scaffold_5279_11
unknown

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12871..13182
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_12
unknown

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13190..13852
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_13
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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13889..14155
-----------------
DNA (267bp)
protein (89aa)
Ribosomal protein L35AE/L33A n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WT03_9EURY
Ribosomal protein L35AE/L33A {ECO:0000313|EMBL:ENO12068.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
50S ribosomal protein L35Ae
rifcsphigho2_02_scaffold_5279_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14294..15652)
-----------------
DNA (1359bp)
protein (453aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component (EC:1.8.1.4)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:AIF84246.1}; EC=1.8.1.4 {ECO:0000313|EMBL:AIF84246.1};; TaxID=1459636 species="Archaea; Thauma
Putative dihydrolipoamide dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP2_NITGG
rifcsphigho2_02_scaffold_5279_15
Leptotrichia sp. oral taxon 879, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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15764..16210
-----------------
DNA (447bp)
protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2PNA9_9FUSO
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK52000.1}; TaxID=1227268 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 879
N-acetyltransferase GCN5
rifcsphigho2_02_scaffold_5279_16
unknown

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comp(16285..16611)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_17
unknown

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comp(16720..18216)
-----------------
DNA (1497bp)
protein (499aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_18
unknown

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comp(18209..18619)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_19
AR6, Pacearchaeaota, DPANN, Archaea

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18635..19399
-----------------
DNA (765bp)
protein (255aa)
Putative uncharacterized protein Tax=AR6
rifcsphigho2_02_scaffold_5279_20
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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comp(19401..21077)
-----------------
DNA (1677bp)
protein (559aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037DB208
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKQ17609.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
rifcsphigho2_02_scaffold_5279_21
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(21325..21921)
-----------------
DNA (597bp)
protein (199aa)
WAAE; ADP-heptose synthase; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] id=5044222 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RfaE bifunctional protein Tax=GWA2_OD1_40_9
rfaE bifunctional protein
rifcsphigho2_02_scaffold_5279_22
AR17, Woesearchaeaota, DPANN, Archaea

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22355..23125
-----------------
DNA (771bp)
protein (257aa)
Putative uncharacterized protein Tax=AR17
rifcsphigho2_02_scaffold_5279_23
RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated, Roizmannbacteria, Microgenomates, Bacteria

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23122..23784
-----------------
DNA (663bp)
protein (221aa)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily id=51282 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
rifcsphigho2_02_scaffold_5279_24
RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated, Roizmannbacteria, Microgenomates, Bacteria

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23781..24695
-----------------
DNA (915bp)
protein (305aa)
iunH1; inosine-uridine preferring nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1] Tax=RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Inosine-uridine preferring nucleoside hydrolase protein id=1826509 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
rifcsphigho2_02_scaffold_5279_25
unknown

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24726..25178
-----------------
DNA (453bp)
protein (151aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON id=5103729 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_5279_26
unknown

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comp(25210..27369)
-----------------
DNA (2160bp)
protein (720aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_27
unknown

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comp(27371..29308)
-----------------
DNA (1938bp)
protein (646aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5279_28
unknown

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comp(29319..30233)
-----------------
DNA (915bp)
protein (305aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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