ggKbase home page

rifcsphigho2_02_scaffold_12567_5

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_19b

near complete RP 31 / 55 MC: 6 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 3
Location: 1667..1936

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 87.0
  • Bit_score: 126
  • Evalue 1.50e-26
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 78.0
  • Bit_score: 91
  • Evalue 4.90e-16
RNA polymerase dimerization similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 84.0
  • Bit_score: 74
  • Evalue 2.30e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR9 → Archaea

Sequences

DNA sequence
Length: 270
ATGGAATTCGTCGTTGTTGAAGAATCTAAAACTAAACTGGTATTTGATCTTAGAGGAGAGACCCATACTTTTGCTAATCTCCTAAAAGAAGAATTACTTAGCACCAAAGGTGTAACAACTGCTTCGTATCGTGTCGATCATCCTCTAACCGGTGTCCCGCGCTTCTTAGTAGAAACCAAAGGCGTTGAACCTCGTAAAGCATTAAAAGAAGCTCTTAATAGCATCAAGAAAAAAGCAGAAACCTTCAAGAAAGAAGTTGCTGAATTCTAG
PROTEIN sequence
Length: 90
MEFVVVEESKTKLVFDLRGETHTFANLLKEELLSTKGVTTASYRVDHPLTGVPRFLVETKGVEPRKALKEALNSIKKKAETFKKEVAEF*