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rifcsplowo2_12_scaffold_8282

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_8282_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(1..207)
-----------------
DNA (207bp)
protein (69aa)
hypothetical protein id=18248509 bin=AR5_curated_draft species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
aromatic ring hydroxylating enzyme
rifcsplowo2_12_scaffold_8282_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(247..519)
-----------------
DNA (273bp)
protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Meth
Acylphosphatase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF7_METFV
acylphosphatase
rifcsplowo2_12_scaffold_8282_3

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752..871
-----------------
DNA (120bp)
protein (40aa)
Marine sediment metagenome DNA, contig: S01H1_S20915 {ECO:0000313|EMBL:GAG21404.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_12_scaffold_8282_4
CG_Woesearch_02, Woesearchaeota, Archaea

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939..1505
-----------------
DNA (567bp)
protein (189aa)
Sua5/YciO/YrdC/YwlC family translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Woesearch_02
Uncharacterized protein MJ0062 id=5799697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation factor sua5
rifcsplowo2_12_scaffold_8282_5
CG_Woesearch_02, Woesearchaeota, Archaea

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1549..2199
-----------------
DNA (651bp)
protein (217aa)
metallophosphoesterase Tax=CG_Woesearch_02
Metallophosphoesterase id=5799698 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsplowo2_12_scaffold_8282_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2196..2465)
-----------------
DNA (270bp)
protein (90aa)
Tax=CG_Woesearch_02
rifcsplowo2_12_scaffold_8282_7
unknown

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2586..3422
-----------------
DNA (837bp)
protein (279aa)

This feature has no annotations

rifcsplowo2_12_scaffold_8282_8
unknown

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3519..4505
-----------------
DNA (987bp)
protein (329aa)

This feature has no annotations

rifcsplowo2_12_scaffold_8282_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(4510..5292)
-----------------
DNA (783bp)
protein (261aa)
Hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_13_Woesearchaeota_36_6_curated
Hydrolase, TatD family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV id=5103022 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hydrolase, TatD family
rifcsplowo2_12_scaffold_8282_10
AR17, Woesearchaeaota, DPANN, Archaea

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5429..6454
-----------------
DNA (1026bp)
protein (342aa)
putative deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=AR17
deoxyhypusine synthase, putative (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=5048269 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative deoxyhypusine synthase (EC:2.5.1.46)
rifcsplowo2_12_scaffold_8282_11
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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6654..7424
-----------------
DNA (771bp)
protein (257aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_13_WOR_2_41_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=sediment metagenome RepID=D9PK30_9ZZZZ
rifcsplowo2_12_scaffold_8282_12
unknown

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comp(7430..7825)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsplowo2_12_scaffold_8282_13

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7938..8447
-----------------
DNA (510bp)
protein (170aa)
Marine sediment metagenome DNA, contig: S01H1_S40554 {ECO:0000313|EMBL:GAG44618.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5048744 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_12_scaffold_8282_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8515..8751
-----------------
DNA (237bp)
protein (79aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
rifcsplowo2_12_scaffold_8282_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8748..9149
-----------------
DNA (402bp)
protein (134aa)
PilT protein domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
rifcsplowo2_12_scaffold_8282_16
AR11, Woesearchaeaota, DPANN, Archaea

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9190..10470
-----------------
DNA (1281bp)
protein (427aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=AR11
bifunctional phosphopantothenoylcysteinedecarboxylase/phosphopantothena te synthase (EC:4.1.1.36)
phosphopantothenoylcysteine decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287AA8A
rifcsplowo2_12_scaffold_8282_17
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

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10467..11309
-----------------
DNA (843bp)
protein (281aa)
putative archaeal kinase (sugar kinase superfamily); K06982 pantoate kinase [EC:2.7.1.169] Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
hypothetical protein; K06982 id=68373 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
kinase (sugar kinase superfamily)
rifcsplowo2_12_scaffold_8282_18
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

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11306..11473
-----------------
DNA (168bp)
protein (56aa)
hypothetical protein; K09722 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
Uncharacterized protein (EC:6.3.2.36 6.3.2.1)
hypothetical protein, partial n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B73BB9
Displaying 18 items

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