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rifcsplowo2_12_scaffold_19339

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_19339_1

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comp(1..1074)
-----------------
DNA (1074bp)
protein (358aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ATP synthase A1 subunit C
rifcsplowo2_12_scaffold_19339_2

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comp(1071..1625)
-----------------
DNA (555bp)
protein (185aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=5044031 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
H+transporting two-sector ATPase E subunit
rifcsplowo2_12_scaffold_19339_3

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comp(1647..1880)
-----------------
DNA (234bp)
protein (78aa)
A1AO H+ ATPase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] id=5042345 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:KHO46843.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO46843.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
V-type ATP synthase subunit K (EC:3.6.3.14)
rifcsplowo2_12_scaffold_19339_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1908..3761)
-----------------
DNA (1854bp)
protein (618aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=AR11
V-type ATPase 116 kDa subunit id=5800548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
archaeal/vacuolar-type H+-ATPase subunit I
rifcsplowo2_12_scaffold_19339_5
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(3763..4080)
-----------------
DNA (318bp)
protein (106aa)
ATP synthase, H subunit n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAH1_9EURY
ATP synthase, H subunit {ECO:0000313|EMBL:EGQ40983.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
ATP synthase H subunit
rifcsplowo2_12_scaffold_19339_6

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comp(4135..5013)
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50141.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
coiled-coil id=5044027 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_19339_7
unknown

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comp(5058..6146)
-----------------
DNA (1089bp)
protein (363aa)

This feature has no annotations

rifcsplowo2_12_scaffold_19339_trna_1
unknown

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6294..6368
-----------------
DNA (75bp)
transferRNA
rifcsplowo2_12_scaffold_19339_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6540..6893)
-----------------
DNA (354bp)
protein (118aa)
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=AR11
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5042284 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsplowo2_12_scaffold_19339_9

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comp(6991..7644)
-----------------
DNA (654bp)
protein (218aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000313|EMBL:KHO50144.1}; EC=6.3.5.7 {ECO:0000313|EMBL:KHO50144.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsplowo2_12_scaffold_19339_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(7619..7858)
-----------------
DNA (240bp)
protein (80aa)
glutamyl-tRNA(gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=RBG_13_Woesearchaeota_36_6_curated
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glutamyl-tRNA(Gln) amidotransferase, subunit E
rifcsplowo2_12_scaffold_19339_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(7846..8085)
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
id=5103880 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_12_scaffold_19339_12

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comp(8069..9187)
-----------------
DNA (1119bp)
protein (373aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5240589 bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_12_scaffold_19339_13
unknown

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comp(9195..9377)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

rifcsplowo2_12_scaffold_19339_14

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comp(9403..11799)
-----------------
DNA (2397bp)
protein (799aa)
hypothetical protein; K13525 transitional endoplasmic reticulum ATPase id=5042288 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46786.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AAA family ATPase, CDC48 subfamily
rifcsplowo2_12_scaffold_19339_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(11900..12316)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_12_scaffold_19339_16
AR11, Woesearchaeaota, DPANN, Archaea

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12432..13112
-----------------
DNA (681bp)
protein (227aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=AR11
phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VP65_9EURY
rifcsplowo2_12_scaffold_19339_17
unknown

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13130..13981
-----------------
DNA (852bp)
protein (284aa)

This feature has no annotations

rifcsplowo2_12_scaffold_19339_18
AR11, Woesearchaeaota, DPANN, Archaea

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comp(13971..14609)
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein; K09722 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] Tax=AR11
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XQV4_9CREN
Displaying 19 items

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