ggKbase home page

rifcsplowo2_02_scaffold_6314_7

Organism: RIFCSPLOWO2_02_FULL_Archaea_Woesearchaeota_37_8

partial RP 34 / 55 MC: 9 BSCG 17 / 51 ASCG 30 / 38 MC: 11
Location: comp(4913..5947)

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6B551 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 334.0
  • Bit_score: 282
  • Evalue 4.40e-73
Uncharacterized protein {ECO:0000313|EMBL:KKM64859.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 343.0
  • Bit_score: 337
  • Evalue 2.80e-89
MscS Mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 326.0
  • Bit_score: 274
  • Evalue 4.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 1035
ATGGCAATAAACAATACACTAAATATTGAAATAATTACTGCATTAGCTGGCATTTTAGCGTCATTCATCGCTGCCAAGATTTTATATTTTATTATAAATAAGTACATCAAAACCCTTACAAGAAAAACTAAGACAGATTTAGATGATAAGCTTATTGCAGCTTTAGAGAAGCCTTTTGTTTTAGGAATTGTCCTTATAGGAATCTATTTCTCTCTATACAGTATTGACTATATAAGACAAAAAATTGAACTGATGAATGATATTTTCTTTGTGATGGGGGTTCTTTGGTCAATTTTTGTATTGTACAGGATTACGAAAGTTGCCATGGAAAAATGGCTATCAGTAAATTCAAACTTCCAGAATATGCCTAAGCTTGTTATAAAAGTAATAAACATATTCATTTACTTTATTGGGCTTATTATTATATTAAAGCATTTTAATGTTGAAATAACTCCATTAGTAGCGACTTTGGGAATTGGAGGAATTGCCATTGGCTTTGCTTTGCAAGACACCTTATCAAATTTCTTTGCGGGACTGCATATAATTTCAGATAAGCCAATAAATATTGGGGATTTTGTTGAATTAGAAGGTAACGTAAGTGGATATATCGAGGATATTGGATGGCGCACAACGAGAATAAGAACACTACCAAACACGTTAGTTATAGTGCCAAACTCAAAAATAGCATCCACAATCATAACAAACGATTCTTTGCCTGTGCCTGAGATGAGTGTTGTTATACAATGCGGAGTTGCCTATACTTCTGACTTGGAAAAAGTTGAAGAAGTTACTGTAGATGTAGCGAGAAAAATACAAAAAATAGTTAGTGGGGCCGTCAAGGGCTTTGAACCGTTTATAAGATACCACACTTTTGGAGACTCAAATATTAATTTTTCCATCATTCTCAGGGTTGAAAAATTTGTTGACAAATATTTAGTAACACATGAGTTTATAAAAGCATTAAAAAAAGCGTACGACAAAGAGGGCATTGAGATTTCATGGCCTATAAGGAAGATATACTATGGCAATAGTTGA
PROTEIN sequence
Length: 345
MAINNTLNIEIITALAGILASFIAAKILYFIINKYIKTLTRKTKTDLDDKLIAALEKPFVLGIVLIGIYFSLYSIDYIRQKIELMNDIFFVMGVLWSIFVLYRITKVAMEKWLSVNSNFQNMPKLVIKVINIFIYFIGLIIILKHFNVEITPLVATLGIGGIAIGFALQDTLSNFFAGLHIISDKPINIGDFVELEGNVSGYIEDIGWRTTRIRTLPNTLVIVPNSKIASTIITNDSLPVPEMSVVIQCGVAYTSDLEKVEEVTVDVARKIQKIVSGAVKGFEPFIRYHTFGDSNINFSIILRVEKFVDKYLVTHEFIKALKKAYDKEGIEISWPIRKIYYGNS*