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rifcsplowo2_02_scaffold_3031_9

Organism: RIFCSPLOWO2_02_FULL_Archaea_Pacearchaeota_30_10

near complete RP 31 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 31 / 38 MC: 3
Location: comp(11240..11905)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 257.0
  • Bit_score: 175
  • Evalue 8.90e-41
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 259.0
  • Bit_score: 144
  • Evalue 1.20e-31
DNA-directed RNA polymerase subunit D similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 255.0
  • Bit_score: 141
  • Evalue 3.80e-31

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Taxonomy

RBG_13_Pacearchaeota_36_9_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 666
ATGATAAAAATAAAAAACTACGATAAAGAAAAGCAAAGGATGCAGTTTATAGCTGATATGGAAACAAGTTTAGCGAATGCTATTAGAAGAAGTGTTTTAGAAATTCCTATAATGGCCATAGATGAAGTTGAAATAATAAAAAATGATTCTGCTCTTTATGATGAGATAATTGCCCATAGATTAGGCCTAATACCTATAAAAACTGATAAATCCAGTAAAGAAATAAAATTTAAGTTAAAAGAAATTGGTCCTAAGATGGTGTACGCGACAGATATTACACCATCAATTGGAACAAGATTAAAAATCCCTATTGTAGTCCTTGATAAAGATCAAGAAATAGAAATGGTATGCGAAGCAAGATTAGGAAAAGGGATAGAACACGTAAAATATTCTCCGGGGTTAGTATACTTTAAGCACAATGTTAATGAAGATATATTAGATTATATAATTATTGATGGAGATGGGAAAGTTAGTTGTGATGAAGATCAACTGAAAAATAAAGGAATATCTGAAGAAAAAATAAAAGAGATAAAATCCATTAAAGAAATAAAAGAAATTGAATTTAACCTTGAGTCCTGGGGACAACTAGAAATTAGAGATATTTTTGTAAAAGCTATTGATGTTTTAGAAGCTAATTTAAAAGAACTGGAAAAAGCTGTTAAATAG
PROTEIN sequence
Length: 222
MIKIKNYDKEKQRMQFIADMETSLANAIRRSVLEIPIMAIDEVEIIKNDSALYDEIIAHRLGLIPIKTDKSSKEIKFKLKEIGPKMVYATDITPSIGTRLKIPIVVLDKDQEIEMVCEARLGKGIEHVKYSPGLVYFKHNVNEDILDYIIIDGDGKVSCDEDQLKNKGISEEKIKEIKSIKEIKEIEFNLESWGQLEIRDIFVKAIDVLEANLKELEKAVK*