ggKbase home page

13_1_40cm_4_scaffold_5421_1

Organism: 13_1_40CM_4_Acidobacteria_57_6

partial RP 14 / 55 BSCG 12 / 51 ASCG 2 / 38
Location: 2..994

Top 3 Functional Annotations

Value Algorithm Source
(Uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 319.0
  • Bit_score: 235
  • Evalue 1.40e-58
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF7_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 343.0
  • Bit_score: 204
  • Evalue 1.90e-49
(uracil-5)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 343.0
  • Bit_score: 204
  • Evalue 5.40e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 993
GTCTCGTGGGATGGCGCGATTGTGGAGCATTCCGCGGAGCCATATGGTTATCGCAACCGGGCGCAGTGGGCGGTGCGCAGCGGAATGCCGCGGGCGCTCGGATATTTTCTACCGGAGAGCTCTGTGATTGTGCCCATCGATGAGTGTCCCGTCCTCTCGCCGCGCCTCGCGCACACCTTCGCGCAATTGCAAGAAATGGCGCGCTCCGGAAGACTGCCGGAGAGTATTCAAGAGATAGAAGCCTTTGCCGACTCGGCTGACGAAAAACTTGCGCTGAACGTGGCGTTTGAGAAATTTCCCAAACCAGCGGCGGAGCTGGCGTCCTCTTTTCGGGACGCATTGCCCCAGATCGAAACCTTGCTGTTGCTAGACCAAAAGAAGAACCGGTTTGAATTGACGGGGCCGGGATACTTGACGCACGAAGCCGGCGGATACAAATTTCGCGTCGGCCATCTTTCATTTTTTCAGGTGAATCGCTTCCTGGTCGAGGATTTGCTGAAGACCGTGACGGCCGATGCGCACGGCGCGCTGGCTCTGGATTTATATTCGGGAGTCGGGTTCTTCACATTGCCGCTGGCAAAGTCGTTTCAGAGAGTGCTGAGCGTGGATGCCAATCTGGCCGCGACACGCGATCTCTACGCCAACGCCGAGATAGCAGGTGTCACTGTTGTTTCCCACAACGAACACGTGGAAGAGTTTCTGAAGAAGACTGAAGAAAAACCAGAATTTGTGGTTCTGGATCCGCCGAGGGCAGGATTGGGTGCGGAAGCTGGTGAGAAGCTCGCAGAGCTAGGTGCCAGAGAGATTGTCTATCTTTCCTGTGATCCATCCACACTAGCCCGCGATTTGGCGGTATTGACCTGTTCACCCAGGAAACCTAAAGAAATCGCCGGGCCGAGCATCCGTTATGAAATCACGGAAATGCATTTGTTCGATCTGTTTCCGCAGACCTTTCACATCGAAACGCTCGTGAGGTTGCGAAGAGTGCCATGA
PROTEIN sequence
Length: 331
VSWDGAIVEHSAEPYGYRNRAQWAVRSGMPRALGYFLPESSVIVPIDECPVLSPRLAHTFAQLQEMARSGRLPESIQEIEAFADSADEKLALNVAFEKFPKPAAELASSFRDALPQIETLLLLDQKKNRFELTGPGYLTHEAGGYKFRVGHLSFFQVNRFLVEDLLKTVTADAHGALALDLYSGVGFFTLPLAKSFQRVLSVDANLAATRDLYANAEIAGVTVVSHNEHVEEFLKKTEEKPEFVVLDPPRAGLGAEAGEKLAELGAREIVYLSCDPSTLARDLAVLTCSPRKPKEIAGPSIRYEITEMHLFDLFPQTFHIETLVRLRRVP*