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13_1_40cm_4_scaffold_406_25

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: comp(26656..27852)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 id=4288588 bin=GWC2_Methylomirabilis_70_24 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 384.0
  • Bit_score: 334
  • Evalue 1.90e-88
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 395.0
  • Bit_score: 333
  • Evalue 3.50e-88
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 372.0
  • Bit_score: 312
  • Evalue 1.70e-82

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1197
TTGTCCACAGAGTCCGGTGTCGTCCTGAAAGAACAAGAGGAGGCGACCGAAAGGGACTCATCTGCGGCGATGACCATGGAGGACTACCTCCACTACGAGGCGGAGGCCTTCAAGACCCCCAACCATGGGGATATCGTGGATGGCATCGTCGTACGCGTCGACCCCGACGAGGTGCTGGTAGACATCGGCGCCAAGGCGGAAGGGGTCATCTCGAGCAAGGAGCTCGGCCTTCGCGGCGAGGTCGAATCGATCGGCCTGGAGCCCGGAGATCTGATCAAGGTATACGTCCTCCAGCCCGAGAACGAAGAAGGCAACGTCGTCCTGAGCCTGCGGCGCGCCCGCGCCGAGACCACCTGGCTGGTGGCCGCCGAGAAGCAGGCCGACGGTTCGGTGATCGAAGCCGACGTCCGCGAGCAGAACAAGGGCGGCCTGATCGTCAACGTGCTCGGGCTCCGTGGCTTCCTGCCCTCGAGCCAGGTGGCGCGCGCCTACGCCGGCAGCCTCGAGTCGCTGGTCGGCCAGCGGATCCCCGTCAAGATCCTCGAGGTCAACCGCAAGCGCAACCGGCTGATCGTCAGCCAGAAGGCGGCGGAGGACGAGGATCGCGCACGCAAGCGTGAGGAGCTGTTCAGCCGCCTGCAGATGGGAACCACCGTGAAGGGCACGGTGTCCGGAATCACCAGCTACGGCGCATTCGTCGACATCGGGGGCGCCGATGGCCTGATCCACATTTCCGAGCTCTCGTGGGACCGCGTGTCCAAGGTCACCGACGTTCTGCAGCTCGGAGACGAGGTGACCGTGAAGGTCATCAAGCTCGACCCCGAGCAGACCAGGATCTCGCTCTCACTGCGCCAGCTGCAGCAGGACCCGTGGGAGAAGCTGGTGCAGTCGATGCCGATCGGGTCGATCGTAGAGGGCCAGGTCACCAAGACCAAGAAGTACGGGGCGTTCCTGCAGATCATGGCCGGGATCGAGGGCCTGCTGCACATCTCGGAGCTCTCGTGGGATCACGTGGAGCGGACCGAGGACGTGCTGAAGGTCGGGGAGACGCTGCAGGTGAAGGTGATCGGGATCGACACCGCGCGGCGCCGTATCTCGCTGAGCCTCAAGCAGCTGTCGGCTCCACCGGCGAACCTGGTCGCGAGCCGGGGTGACCGTCGGCACGACGAGTACGACGACATGAGGGACGAGTCCTAG
PROTEIN sequence
Length: 399
LSTESGVVLKEQEEATERDSSAAMTMEDYLHYEAEAFKTPNHGDIVDGIVVRVDPDEVLVDIGAKAEGVISSKELGLRGEVESIGLEPGDLIKVYVLQPENEEGNVVLSLRRARAETTWLVAAEKQADGSVIEADVREQNKGGLIVNVLGLRGFLPSSQVARAYAGSLESLVGQRIPVKILEVNRKRNRLIVSQKAAEDEDRARKREELFSRLQMGTTVKGTVSGITSYGAFVDIGGADGLIHISELSWDRVSKVTDVLQLGDEVTVKVIKLDPEQTRISLSLRQLQQDPWEKLVQSMPIGSIVEGQVTKTKKYGAFLQIMAGIEGLLHISELSWDHVERTEDVLKVGETLQVKVIGIDTARRRISLSLKQLSAPPANLVASRGDRRHDEYDDMRDES*