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rifcsplowo2_02_scaffold_15856_12

Organism: RIFCSPLOWO2_02_FULL_Archaea_Woesearchaeota_30_14

partial RP 37 / 55 MC: 3 BSCG 16 / 51 ASCG 30 / 38 MC: 3
Location: comp(10076..11284)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24426612 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 151.0
  • Bit_score: 85
  • Evalue 1.20e-13
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT43795.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.3
  • Coverage: 428.0
  • Bit_score: 99
  • Evalue 1.10e-17
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 335.0
  • Bit_score: 84
  • Evalue 5.80e-14

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Taxonomy

GWE2_OD1_ACD81_44_13 → Wolfebacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCCTCAGCCTCATAAACTAACTCCCGAACAAGAAAGAGAAGTAGCTCTAGAATACTTATGTGGTGTTAATAACGATGTGATAAGCAGTAGATATAATGTTAGTAGCGCCACAATTAGACCAAATATTGTTCCTAAACGCTCTCGACATTGGAATGACCCACTAGTAGAACTATATAGGCAAGGGGATCCTATTGACAGAGTTAGAAATTCTGCCCATATATATTTGACTTTTCAACTTCCAAACCGAAAAATAAAACCAACAGGTCTAATTGAAGGTTTAAGAGACAAGCCTGTATTTCAAGCTGTAGACGAAACAATTTACCAACCTGTAATTGAAGAAATCCTTACAACTTTGGCACTTAGGCAATATTTAAAAGATTCAAAAGATCCCTATGATGCTTTTCTAGATTCTGTATTTGAACCTTCTGATAGACCTAAAATGCTTGTTGAACCAGTTTTTACAGAAGCTCTTCATGATAAATATATTTTAGGTAGTAGACTTTCACTAAAAGAAGTTGTTGAAAAAGCAAGATTGCAGATTATTCAAAAAGTAAGAAAAGGAGCACTTGGTTATTCTGAATTAAGAAAACGAGAAATAAACGAAATTCTAGAAACATTAACCCCTAGAGAAAAAAGAATAATTGGAATGAAATTCGAGCTTGATGGTTATGATAGATCATCAACAAAAGTACAAATAGCTAACTCTCTTGGTTTAACCAGAAATACAGTAAGTACAATTGAAGCACGTGCCTATAGAAAACTAAGACATCATACTAGACATCAAAGACTTAAATTTGTAGGTGGATTAATTACTGATTCAGATATTGAAGCGTATAATTCACGACAGCGGGCTGCAGAAGCAGCTACAGCATGGAAGGAAATATTGAGACCAGAACTCACAGAGGAAGTTCTACATGAAATAGTAAGAGGAGATTCGAATTTACAACTTCGACTAAAGGAAATAGAAGTTGAACAAAGAGATTTGGATACTGAAAGACTACAAAATTTAAGGAAAAAAAGTGTGGAAGAATTGGAATTTAGTGTAAGAACTTCAAATGTTTTACGAGAAGCTCGCATTACTACAATTGGTCAGCTTGCAGACAAAACTGATAGTGATTTACTTAAATATCAAGGCTTTGGAAGAAAATGCCTTAGAGAAGTTAGAGACATTTTAAATGAAATGGGTTTGTTTCCAGAGACTCATTAA
PROTEIN sequence
Length: 403
MPQPHKLTPEQEREVALEYLCGVNNDVISSRYNVSSATIRPNIVPKRSRHWNDPLVELYRQGDPIDRVRNSAHIYLTFQLPNRKIKPTGLIEGLRDKPVFQAVDETIYQPVIEEILTTLALRQYLKDSKDPYDAFLDSVFEPSDRPKMLVEPVFTEALHDKYILGSRLSLKEVVEKARLQIIQKVRKGALGYSELRKREINEILETLTPREKRIIGMKFELDGYDRSSTKVQIANSLGLTRNTVSTIEARAYRKLRHHTRHQRLKFVGGLITDSDIEAYNSRQRAAEAATAWKEILRPELTEEVLHEIVRGDSNLQLRLKEIEVEQRDLDTERLQNLRKKSVEELEFSVRTSNVLREARITTIGQLADKTDSDLLKYQGFGRKCLREVRDILNEMGLFPETH*