ggKbase home page

13_1_40cm_4_scaffold_1166_24

Organism: 13_1_40CM_4_Nitrospirae_62_6

near complete RP 41 / 55 BSCG 41 / 51 ASCG 10 / 38
Location: 24336..24608

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCA1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 82.0
  • Bit_score: 142
  • Evalue 1.90e-31
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 83.0
  • Bit_score: 144
  • Evalue 6.90e-32
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 82.0
  • Bit_score: 142
  • Evalue 5.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCAACCAAAAAGGGCGGCGGGTCATCCCGGAACGGCCGAGACAGCAATCCGCAGTATCTCGGCGTCAAAGCGTTCAGCGGGGAGCCTGTCAAGGCCGGGAGCATCCTTGTGCGTCAGAGAGGAACCAAGATTCATCCCGGCTTCAATGTGGGCCTCGGGCGCGACCACACGCTGTTTGCACGGATCACCGGCATTGTCAAATACGAAGGCGGCCGGGCGAGGCAGAAAGTCAGCGTCTATCCCCCAGTTCTTGCCTCGACGACGACCTGA
PROTEIN sequence
Length: 91
MATKKGGGSSRNGRDSNPQYLGVKAFSGEPVKAGSILVRQRGTKIHPGFNVGLGRDHTLFARITGIVKYEGGRARQKVSVYPPVLASTTT*