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13_1_40cm_4_scaffold_4208

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4208_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2..172
DNA (171bp) protein (57aa)
secE; preprotein translocase SecE subunit; K03073 preprotein translocase subunit SecE
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4208_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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172..717
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N2_GEMAT
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination/antitermination factor NusG
13_1_40cm_4_scaffold_4208_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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721..1146
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UHI4_9FIRM
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplK; 50S ribosomal protein L11
13_1_40cm_4_scaffold_4208_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1146..1835
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Thermincola potens (strain JR) RepID=D5X9V0_THEPJ
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein L1
13_1_40cm_4_scaffold_4208_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1832..2368
DNA (537bp) protein (179aa)
50S ribosomal protein L10 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLE0_THEM7
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L10
13_1_40cm_4_scaffold_4208_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2382..2792
DNA (411bp) protein (137aa)
50S ribosomal protein L7/L12 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N6_GEMAT
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplL; 50S ribosomal protein L7/L12
13_1_40cm_4_scaffold_4208_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2893..5559
DNA (2667bp) protein (889aa)
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
DNA-directed RNA polymerase subunit beta
13_1_40cm_4_scaffold_4208_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5588..7378
DNA (1791bp) protein (597aa)
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
13_1_40cm_4_scaffold_4208_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7394..11713
DNA (4320bp) protein (1440aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT
DNA-directed RNA polymerase subunit beta
13_1_40cm_4_scaffold_4208_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(11818..14553)
DNA (2736bp) protein (912aa)
hypothetical protein id=24475677 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_4208_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14678..15061
DNA (384bp) protein (128aa)
30S ribosomal protein S12 n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHQ4_9BACT
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWC2_Gemmatimonadetes_71_10_curated
rpsL; 30S ribosomal protein S12
13_1_40cm_4_scaffold_4208_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


15058..15528
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS7_GEMAT
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein S7
13_1_40cm_4_scaffold_4208_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15670..17766
DNA (2097bp) protein (699aa)
Elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFG_GEMAT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
translation elongation factor G
13_1_40cm_4_scaffold_4208_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17776..18489
DNA (714bp) protein (238aa)
Elongation factor Tu n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFTU_GEMAT
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RBG_16_Gemmatimonadetes_66_8_curated
translation elongation factor Tu
Displaying 14 items

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