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13_1_40cm_4_scaffold_1791_26

Organism: 13_1_40CM_4_Betaproteobacteria_64_4

partial RP 28 / 55 MC: 1 BSCG 27 / 51 MC: 1 ASCG 4 / 38
Location: comp(18688..20121)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH21_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 497.0
  • Bit_score: 577
  • Evalue 9.20e-162
RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 482.0
  • Bit_score: 584
  • Evalue 1.40e-163
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 497.0
  • Bit_score: 576
  • Evalue 7.60e-162

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Taxonomy

R_Betaproteobacteria_64_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
GTGAAGCCGACTTTACAGCTCAAGCTTAGTCAGCATCTCACGCTGACCCCGCAACTGCAGCAGTCGATCCGCCTGCTGCAGCTCTCCACGCTCGAGCTCAACGCCGAGGTCGAGCGTCTCTTGCAGGAAAACCCGTTGCTGGAGAAAGCCGAGGATGAGGAGTCCGCCGGTCCGCCGCGAGAATTTACGACGATGGTTTCCACGCCAGCCACCGACAAGCCGGGCGATGGCGCCGACGACTCGGCGCCGGAAGCCGCGGACCTGCTGGTCAGCGCCGGCGACGGCGATTGGGGCTCGTCTACGCGCGGCAGCGACGACGATGACGAGACCTTCCTGCCACAACAGGTGGCGACGAACTCGCTGCGCGATCACCTGAACGCCCAGCTCGCGCTGCTCAATCTTCCGCTGCGCGATCGCCAGATCGTTGCGGCGCTGATCGATGCGCTCGACGAGGACGGTTACCTCACGACGTCGCTCGAGGAGCTGCTCGAGCTCTTCCCTGAAGAAATCGAGCTCGAGGCCGACGAGCTGTCGATCGCGCTCAAGCATCTGCAGTGTATGGAGCCTGCCGGAGTCGGCGCCCGCGACGCCGCCGAATGCCTCACGCTGCAGCTCAAAACGCTGCCCGAGTCGACGCCTTTCCGCGGCGAAGCGTTGAAGCTCGTGCAGCACCATCTGCCGCTCCTGGCGGCGCGCGATTTCGGCAAGTTGAAGCGCCTGCTGCACGCGGACGACGCCTGCCTGCGCTGCGTGCGCACGCTGATCACAAGCCTCAACCCGCGCCCCGGCGCCGGCTTTTCCAAGACCGAGGCGAACTATGTGATTCCGGATGTGGTCGTACGGAAGCTCCGGGGAAGGTGGATCGCGGCGCTTAACGAGGCGGCGATGCCCAAGCTGCGGCTGAACCGCATCTATGCCGACATCCTCACCCGCAATCGCGAGGCTTCGAACCAGCAACTCGCCGCGCAGTTGCAGGAAGCGAAATGGCTGATCCGCAACGTTCAGCAGAGGTTCGAGACGATCCTGCGCGTATCGCAGGCGATTGTCGACCGCCAACGCCACTTCTTCGAGCACGGCGAAGTGTCGATGCGGCCGATGGTGCTGCGCGAGATCGCCGAAATCCTGGGTTTGCACGAGTCGACGATCTCGCGCGTGACGACGCAGAAATACATGCTCACGCCGCGCGGCACCTACGAGCTCAAGTATTTCTTCGGCAGCCACGTCGCGACCGACACCGGCGGCGCGGCTTCCGCGACCGCCATCCGGGCGCTGATCAAGCAGTTGATCGGCGCCGAGGATCCCAAATTACCGCTGACCGACAGCCGCATCGCCGACCTCCTCGGCGATCAGGGCATCCTCGTCGCGCGGCGGACGATCGCCAAATACCGGGAGGCGCTGCAGATTCCTCCCGTCAACGTGCGCAAGGCGGTGTGA
PROTEIN sequence
Length: 478
VKPTLQLKLSQHLTLTPQLQQSIRLLQLSTLELNAEVERLLQENPLLEKAEDEESAGPPREFTTMVSTPATDKPGDGADDSAPEAADLLVSAGDGDWGSSTRGSDDDDETFLPQQVATNSLRDHLNAQLALLNLPLRDRQIVAALIDALDEDGYLTTSLEELLELFPEEIELEADELSIALKHLQCMEPAGVGARDAAECLTLQLKTLPESTPFRGEALKLVQHHLPLLAARDFGKLKRLLHADDACLRCVRTLITSLNPRPGAGFSKTEANYVIPDVVVRKLRGRWIAALNEAAMPKLRLNRIYADILTRNREASNQQLAAQLQEAKWLIRNVQQRFETILRVSQAIVDRQRHFFEHGEVSMRPMVLREIAEILGLHESTISRVTTQKYMLTPRGTYELKYFFGSHVATDTGGAASATAIRALIKQLIGAEDPKLPLTDSRIADLLGDQGILVARRTIAKYREALQIPPVNVRKAV*