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13_1_40cm_4_scaffold_18276_20

Organism: 13_1_40CM_4_Betaproteobacteria_64_4

partial RP 28 / 55 MC: 1 BSCG 27 / 51 MC: 1 ASCG 4 / 38
Location: comp(12622..13119)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q947_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 174.0
  • Bit_score: 139
  • Evalue 2.90e-30
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 165.0
  • Bit_score: 144
  • Evalue 9.70e-32
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 174.0
  • Bit_score: 139
  • Evalue 8.20e-31

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGGACGCGTGATCGGCGCCTACGGCGTGCAGGGCTGGATCAAGGCGCGTACTTTCACCGCCTCACCCGAGGGTTTGCTCGCGTACCGGGCGTGGTGGCTCGCAATGGGTGATGGTCGACGGCGCGAGTTTGCGGTGCTCGAGGCGCGTGTGCATGCTGTCGGATTGGTCGCGCGGCTCGAGGGAATGAACTGGCGCGAGGATGCGGCGCCATGGCGAGGCGCCGCTATCGGCGTGCCGAGGGGTTCGCTCCCCGCGCTCGCTGCGGGCGAGGTCTATCTCGCGGACTTGGTCGGCCTTGCGGTGATCAACCGCTCCGGCGTGATCCTCGGACGGGTCGGCAGCGTGCTCGAGACGGGTGCGCATCCGGTGCTGCGAATAGCCGCGGAGGGGCGTGTTGACGGCGGCGAGCGGCTGATACCGCTGGCGCCGGCCTACGTCGACGCGATCGATGTTACCGGAGGCCGGATCGTGGTCGACTGGCAACCGGATTACTGA
PROTEIN sequence
Length: 166
MGRVIGAYGVQGWIKARTFTASPEGLLAYRAWWLAMGDGRRREFAVLEARVHAVGLVARLEGMNWREDAAPWRGAAIGVPRGSLPALAAGEVYLADLVGLAVINRSGVILGRVGSVLETGAHPVLRIAAEGRVDGGERLIPLAPAYVDAIDVTGGRIVVDWQPDY*