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13_1_40cm_4_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_176_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(317..778)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA88_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40731.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_176_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

988..1566
DNA (579bp) protein (193aa)
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14627622 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_176_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1568..1747
DNA (180bp) protein (60aa)
id=14627623 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627623 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_176_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1983..2597
DNA (615bp) protein (205aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4367554 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_176_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2594..4213
DNA (1620bp) protein (540aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=3526206 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_176_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4218..5456
DNA (1239bp) protein (413aa)
Putative uncharacterized protein id=3526204 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_176_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5534..5926
DNA (393bp) protein (131aa)
HEPN domain protein id=4915851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HEPN domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
HEPN domain-containing protein
13_1_40cm_4_scaffold_176_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5895..6248
DNA (354bp) protein (118aa)
DNA polymerase subunit beta Tax=GWC2_Rokubacteria_70_16_curated
DNA polymerase, beta domain protein region id=4915850 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA polymerase subunit beta
13_1_40cm_4_scaffold_176_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6245..6640)
DNA (396bp) protein (132aa)
adenylate/guanylate cyclase id=14429036 bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase Tax=CSP1_5_NC10
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_176_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6637..6942)
DNA (306bp) protein (102aa)
response regulator receiver protein; K11443 two-component system, cell cycle response regulator DivK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator receiver protein id=4206247 bin=GWC2_Methylomirabilis_70_24 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator receiver protein
13_1_40cm_4_scaffold_176_11
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6956..8527)
DNA (1572bp) protein (524aa)
hypothetical protein id=14623050 bin=bin5_DeltaP species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
TPR repeat-containing protein
13_1_40cm_4_scaffold_176_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8637..8927)
DNA (291bp) protein (97aa)
UPI0003CF4E28 related cluster n=1 Tax=unknown RepID=UPI0003CF4E28
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
13_1_40cm_4_scaffold_176_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8935..9288)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3956328 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_176_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9315..9950)
DNA (636bp) protein (212aa)
hypothetical protein; K07006 Tax=GWC2_Rokubacteria_70_16_curated
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=3191858 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphohydrolase
13_1_40cm_4_scaffold_176_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9975..10484)
DNA (510bp) protein (170aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4388228 bin=GWA2_Methylomirabilis_73_35 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_176_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10534..10860)
DNA (327bp) protein (109aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3784125 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_176_17
unknown

Not on your lists

comp(10862..10960)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_4_scaffold_176_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11177..11473
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4388230 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_176_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11475..12491
DNA (1017bp) protein (339aa)
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase id=4558922 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_176_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12653..12901
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_176_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12898..13785)
DNA (888bp) protein (296aa)
Peptidase, M23/M37 family id=4388234 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_176_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13782..14663)
DNA (882bp) protein (294aa)
Putative uncharacterized protein id=4388235 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_176_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14819..15553
DNA (735bp) protein (245aa)
id=3659328 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626564 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_176_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15642..16154)
DNA (513bp) protein (171aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative ADP-ribose pyrophosphatase (EC:3.6.1.13)
NUDIX hydrolase id=4388290 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_176_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16316..17179)
DNA (864bp) protein (288aa)
mrp; putative ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ATPase, Mrp homolog id=4388291 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ParA/MinD ATPase-like protein
13_1_40cm_4_scaffold_176_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17176..17610)
DNA (435bp) protein (145aa)
id=14626560 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=4488144 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_176_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17607..18920)
DNA (1314bp) protein (438aa)
putative heme d1 biosynthesis radical SAM protein NirJ2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM protein id=14626559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM protein
13_1_40cm_4_scaffold_176_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19145..21043)
DNA (1899bp) protein (633aa)
putative universal stress protein UspA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative universal stress protein UspA id=14626558 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
putative universal stress protein UspA
13_1_40cm_4_scaffold_176_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21070..21843)
DNA (774bp) protein (258aa)
Uncharacterized protein id=3202774 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
lipoprotein
13_1_40cm_4_scaffold_176_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21962..22330)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F3656
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
Displaying items 1-30 of 50 in total

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