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13_1_40cm_4_scaffold_1814

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1814_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..257
-----------------
DNA (255bp)
protein (85aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V565_9BRAD
Cytochrome c class I {ECO:0000313|EMBL:EFI53095.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome C
13_1_40cm_4_scaffold_1814_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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254..1747
-----------------
DNA (1494bp)
protein (498aa)
multicopper oxidase type 3 id=14626019 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
multicopper oxidase type 3 Tax=CSP1_6_Rokubacteria
multicopper oxidase, type 3
13_1_40cm_4_scaffold_1814_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1787..2296
-----------------
DNA (510bp)
protein (170aa)
resA; thiol-disulfide oxidoreductase resA id=14626589 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
resA; thiol-disulfide oxidoreductase resA Tax=CSP1_6_Rokubacteria
resA; thiol-disulfide oxidoreductase resA
13_1_40cm_4_scaffold_1814_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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2293..3168
-----------------
DNA (876bp)
protein (292aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_4_scaffold_1814_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3250..3861
-----------------
DNA (612bp)
protein (204aa)
methyltransferase Tax=GWC2_Rokubacteria_70_16_curated
Methyltransferase type 11 id=3239349 bin=GWC2_Methylomirabilis_70_16 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type 11 methyltransferase
13_1_40cm_4_scaffold_1814_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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3933..4172
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein id=14627758 bin=bin7_NC10_sister species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1814_7
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4175..5347
-----------------
DNA (1173bp)
protein (391aa)
membrane protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037BCE83
Mycobacterium llatzerense strain CLUC14 Mllat_contig000003, whole genome shotgun sequence {ECO:0000313|EMBL:KIU18492.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
integral membrane protein
13_1_40cm_4_scaffold_1814_8
unknown

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6068..6265
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_1814_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6538..6951
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0L8_ACIFD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_1814_trna_1
unknown

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comp(7359..7434)
-----------------
DNA (76bp)
transferRNA
13_1_40cm_4_scaffold_1814_10
unknown

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comp(7458..8165)
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

13_1_40cm_4_scaffold_1814_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8282..8662
-----------------
DNA (381bp)
protein (127aa)
id=14626280 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_1814_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8788..9069
-----------------
DNA (282bp)
protein (94aa)
thioesterase superfamily protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thioesterase superfamily protein id=5017002 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioesterase superfamily protein
13_1_40cm_4_scaffold_1814_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(9066..9431)
-----------------
DNA (366bp)
protein (122aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_1814_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(9464..9634)
-----------------
DNA (171bp)
protein (57aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_4_scaffold_1814_15
unknown

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comp(9862..10104)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_1814_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10131..11174)
-----------------
DNA (1044bp)
protein (348aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQZ0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ETW97553.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cyclase
13_1_40cm_4_scaffold_1814_17
unknown

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comp(11294..11650)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_1814_18
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(11752..12114)
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VG54_PSEST
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1814_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12118..12351)
-----------------
DNA (234bp)
protein (78aa)
SirA domain-containing protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] id=14429536 bin=bin3_NC10 species=Yaniella halotolerans genus=Yaniella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
SirA domain-containing protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=CSP1_5_NC10
SirA domain-containing protein
Displaying 20 items

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