ggKbase home page

13_1_40cm_4_scaffold_690

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_690_1
unknown

Not on your lists

1..726
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_40cm_4_scaffold_690_2
unknown

Not on your lists

723..1115
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_4_scaffold_690_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1140..1712)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F9A4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX63987.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Transcriptional regulator
13_1_40cm_4_scaffold_690_4
unknown

Not on your lists

1873..2079
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_690_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2076..2495
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003710F5B
Uncharacterized protein {ECO:0000313|EMBL:ETK35585.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
13_1_40cm_4_scaffold_690_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2485..4233)
DNA (1749bp) protein (583aa)
L-sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-sorbosone dehydrogenase id=4768386 bin=GWC2_Methylomirabilis_70_24 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
L-sorbosone dehydrogenase
13_1_40cm_4_scaffold_690_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4591..5952
DNA (1362bp) protein (454aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Adenylate/guanylate cyclase with TPR repeats id=3866894 bin=GWB1_Deltaproteobacteria_rel_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protein kinase
13_1_40cm_4_scaffold_690_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6139..6540
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCB1_9GAMM
YCII-related protein
YCII-related protein {ECO:0000313|EMBL:AHG88617.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_690_9
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6655..7140
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YUX5_DESAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ49152.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
13_1_40cm_4_scaffold_690_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7304..7831)
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66393.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=12556247 bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_4_scaffold_690_11
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7937..9139
DNA (1203bp) protein (401aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC5_CHLTF
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain-containing protein
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain protein {ECO:0000313|EMBL:AEP12188.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision
13_1_40cm_4_scaffold_690_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9280..9681
DNA (402bp) protein (134aa)
Sensor histidine kinase/response regulator n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJK4_DEHSV
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_40cm_4_scaffold_690_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9733..10857)
DNA (1125bp) protein (375aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT04_RUBXD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter
13_1_40cm_4_scaffold_690_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10906..12162)
DNA (1257bp) protein (419aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZK9_9BACT
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04245.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaraci
sigma-70 region 2 domain protein
13_1_40cm_4_scaffold_690_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12162..12518)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C58D1
Uncharacterized protein {ECO:0000313|EMBL:AKF04246.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
YCII-related protein
13_1_40cm_4_scaffold_690_16
unknown

Not on your lists

comp(12548..12877)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_4_scaffold_690_17
unknown

Not on your lists

comp(12932..13807)
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_40cm_4_scaffold_690_18
unknown

Not on your lists

14116..14289
DNA (174bp) protein (58aa)
hypothetical protein
13_1_40cm_4_scaffold_690_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

14409..14666
DNA (258bp) protein (86aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 19 items

View Taxonomy