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13_1_40cm_4_scaffold_2275_22

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 16749..17252

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 167.0
  • Bit_score: 251
  • Evalue 9.70e-64
16S rRNA-processing protein RimM id=5019513 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 161.0
  • Bit_score: 237
  • Evalue 7.90e-60
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 168.0
  • Bit_score: 120
  • Evalue 4.00e-25

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGGTCATCGGCGAGATCGTGCGCGCCCACGGCCTGCGGGGCGAGGTCCGGGTGGTGCCGCTGACGGACGACCCGGCGCGGTTCGCGCGGGTGCGCACGTGCGTGCTGTGGGACAGGAGGCGGGACGAGCGGGAGCCGCGGCGCGTCGTCGCGGCCCGGCCGCAGGGCCAGGCCATCTTGATGTCGCTGGCGGGCTGCGAGTCCGCCGAAGCGGCCAGGGCCCTGGCCGGACGGCTGATCGCGATCCCGGAGTCCGAGGCGTTGCCGCCCGGGCCCGGGCGCTTCTACCCCTGGCAGCTCGAAGGCTGTCGGGTGGTGACGGAGGACGGAGCCGAGGTCGGCCGCGTGACGCGCATCGAGGCGGCGCCGGCGCAGGACCTCTGGGTCGTCGAGGACGGCCCGCGCGAGCATCTCATCCCGGCCGTGCCGGAGATCGTGCTCGACGTGGATCTGGCCGCCCGCCGGGTCGTCATCCGGCCTCCCGAGGGCCTCCTCGACCTGTAG
PROTEIN sequence
Length: 168
VVIGEIVRAHGLRGEVRVVPLTDDPARFARVRTCVLWDRRRDEREPRRVVAARPQGQAILMSLAGCESAEAARALAGRLIAIPESEALPPGPGRFYPWQLEGCRVVTEDGAEVGRVTRIEAAPAQDLWVVEDGPREHLIPAVPEIVLDVDLAARRVVIRPPEGLLDL*