ggKbase home page

13_1_40cm_4_scaffold_2758_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 1482..4955

Top 3 Functional Annotations

Value Algorithm Source
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 999.99
  • Bit_score: 1891
  • Evalue 0.0
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 999.99
  • Bit_score: 1331
  • Evalue 0.0
DNA polymerase III, alpha subunit id=4891633 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 999.99
  • Bit_score: 1609
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3474
ATGCAGCACAGCGAGTTCGTCCACCTCCACGTCCACTCCGAGTACAGTCTTCTCGATGGCGCCGCCCAGCTCGAAAAGCTCGTCCTCAAGGCGAAGGAGCTGCGCTTCCCGGCCCTCGCGCTCACCGACCACGGCAGCCTGTTCGGCGCCATCGACTTCTACCTGGCCGCCCAGAAGGCCGGCATCAAGCCCATCATCGGGTGCGAGCTCTATGTGGCGCCCGGCAGCCGCAAGGAGCGCGGGTCACAGGACGGAGGCTACGAGGGCGCCAACCACCTGACCGTCCTCGTCCGGAACTTCACGGGTTACAAGAACCTCATCAAGCTCGTCTCCCGGGCCTACCTGGAGGGGTTCTACTATAAGCCGCGCGTCGACCGGGAGCTGTTGGCCGCCCACGCCGACGGCCTACTCGTCCTCTCCGGCTGCCTCAACTCCGAGGTGTCGCGGCTCATCTCGGCGGGCGAGCTGGAGCGCGCCAGGGAGGCGGCGGGCTGGCACCGGGAGGTCTTCGGCAAGGACCACTACTTCATGGAGGTCCAGGCTCACGGCCTGGAGGAGCAGGCGAAGGTCACTGGAGAGACCCTCCGCATCGCCGGGGCCCTGGCCGCGCCCATCGTGGGCACCAACGACTCCCACTATCTCGAGGCCGGCCACGCCAAGGCCCACGAGGCACTGCTCTGTATCCAGACCGGGACGACCCTGCTCGACGCCAAGCGCTGGCGGTTCGCCACCAACGAGTTCTACCTGAAATCGGCCGAGGAGATGGCCGGCGTCTTCACCGAGCTGCCCGAGGCCTGCCGGAACACCCTGGCCGTGGCCGAGCGCTGTAATCTGACGCTCGAGTTCGGCAGCTTCCACCTGCCGCGCTACGTCGTCCGCGACGGCCACACGCTCGAGAGCTACCTCGAGCACCTGGCCCGGGAGGGACTCCGCCGGCGCTACGGGTCGACGCCCGGCGACGGCGTCGAGGCCCGGCTGGGCCATGAGCTCAGCATCATCGAGAAGATGGGCTTCGCCGGGTACTTCCTGGTCGTCTGGGACTTCATCCGCTACGCGCGCGAGCAGGGGATCGCCGTCGGCCCCGGGCGCGGTTCGTCGGCCGGCTCGCTCGTCGCCTATTGCCTCGGCATCACGAACATCGACCCCCTCCGGTACGGCCTGCTGTTCGAGCGGTTCTTGAATCCGGAACGGATCTCGATGCCGGACATGGACATCGACTTCGCCGACGACCGCCGGGACGAAGTCATCCGCTACGTGGCCGACCGCTACGGGCGGGACCGGGTCGCCCACATCATCACGTTCGGCACGCTGGGGGCGAAGGCGGCCATCCGGGACGTGGGCCGCGTCCTGGGGATGACGTACGCGGACGTCGATCGGATCGCCAAGTTGGTGCCGGCCTTCCCCTTGAACATCACGCTGGAGGAGGCGTACCAGAAATCGCCGCCCCTGGCCGAGATGGTGCGAACCCAGGGGAACGTGCGCGAGCTGTGGGAGGTCGCCCGCACGCTCGAGGGGTGCACGCGGCACGCCTCGGTCCACGCCTCGGCGGTGGTCATCGCCGACGAGCCGCTGGACGAGTACATTCCCCTCTACAAGGACCCCAAGCGGCCCGAGCTGATCACGGGCTACGCCATGGGGCCGATCGAGAAGCTCGGCCTCCTCAAGATGGATTTCCTGGGGCTGCGGACGCTCACCGTGCTCGCCAACACGGTAAGGCTCATCCACCAGTCGCGCGAGATCGAGATCGACCTCGACGCGCTGCCGCTCGACGACGCCAAGACCTACCTGATGCTCTCGGAGGCCAAGACTTTCGGTGTCTTCCAGCTGGAGTCGGCAGGCATGCGCGACGCTCTCCGCGGCCTCCGGCCTTCGAGTCTCGAAGATGTCATCGCGATGGTGTCGCTCTACCGGCCGGGACCGATGGAGCTGATCCCGGACTTCATCAACCGCAAGCATGGCCGGGCCAAGATCGCCTACGAGCACCCGGCCATGGAGAAGTTCACCCGCGAGACGTACGGCATCATGGTCTACCAGGAGCAGATCATGCAGATCGCCTCCGAGATGGCGGGCTTCACCATGGGCGAGGCGGACATGCTCCGCCGGGCCATGGGCAAGAAGGACCGCGATCTCATGGCGCAGCAGCGCGACAAGTTCATCGCCGGCTGCCGCGAGCGCGGCACTCCGGCCGCCAAGGCCGAGCACGTGTGGGAGTTGATGGAGAAGTTCGCGGGGTACGGATTCAACAAGTCGCACGCGGCGGCCTACGCGCTGGTCGCCTACCAGACGGCCTACTTCAAGGCGACCTATCCCGTGGAGTTCATGGCGGCGCTGCTGACGTCGGAAATGGGCGACACCGACAAGATCGTCAAGTACATCGAAGAGTGCCGGGCAATGGGCATCCGGGTCGATCCGCCCGACGTCAACGTGTCGACCGTGAAGTTCAGCGTCTGCGGCGATGCCATCCGCTTCGGGCTGGCCGCGATCAAGAACGTGGGCGAAGCGGCGATGGAATCGATTCTGGCCACCCGCGACGAGGCCGGCCCCTTCAAGAGCCTCCAGGACTTCTGCGCGCGGGTCGATCTGAGGCTGGTGAACCGCCGCGTGCTGGACAGCCTCATCAAGGCCGGCGCCTTCGACTCTCTGGGCCTGCCGCGCGCCCACCTGATGGCCAGCGCCGACATCGCGCTCGAGGCCGGGCAGCGACAGCAGCGCGAACGCGCCGAGGGCCAGGCCTCGTTCTTCGACCTGCTGCCCTCGGCGCCGGCCCGGCCGCCCGACGAGGCCGTCGGCCCCGTCCCCGAATGGGACGCCGACCAGCGATTGGCGTTCGAGAAGGAGGTGCTGGGCTTCTACGTCTCCGGGCATCCGCTGGCCCGCTACCAGCCGCTGGTGGAGTCGCTCGGCATCACGCGCTCGGGGGAGCTGGTCGCCAAGAGCCCCGGCAGCCGCGTGCTCCTCTTCGGCCAGGTGGTCGCCCTCAAGGAGACGTCGACCAAGAGCGGCAATCGCATGGCCTTTCTCACCCTGGAGGACATGGACGGCACGGTGGAGGTGACCATCTTCCCCGAACCGTTCAAGGCCGCGGCGGAATCGCTCCACGCCAGCGAGCCGCTGCTCATCCGGGGACGGGTCGACGACAGTGACAAGGGACGCGTGGTGCTCGCCGAGGACGTCCGCCCGCTCGAGCGGGCGCTGGCCAACGGACCCGCGATGGCCGCCACCGGAGAGCCGACCACGCTCCGGGTCCGCATCGGCGTCCGGGAGGATCCCCAAGCCCTGCTCGCCGCCGTCAGGCAGCTCTGCGCCGAGCACCCGGGACGCGTTCCCGTCTTCGTCCACCTCCTCTTACCGTCCCAAGAGGTCGTCGTGAGGTCGCACGGCCTCGCGGTCGATCCCAGCCCCGACCTGCTCGCCAAGCTGGGCGCGCTGCTCGGGCCCACCGCCGCCATCGTCGAGCATGCCGGAAGCGCTTGA
PROTEIN sequence
Length: 1158
MQHSEFVHLHVHSEYSLLDGAAQLEKLVLKAKELRFPALALTDHGSLFGAIDFYLAAQKAGIKPIIGCELYVAPGSRKERGSQDGGYEGANHLTVLVRNFTGYKNLIKLVSRAYLEGFYYKPRVDRELLAAHADGLLVLSGCLNSEVSRLISAGELERAREAAGWHREVFGKDHYFMEVQAHGLEEQAKVTGETLRIAGALAAPIVGTNDSHYLEAGHAKAHEALLCIQTGTTLLDAKRWRFATNEFYLKSAEEMAGVFTELPEACRNTLAVAERCNLTLEFGSFHLPRYVVRDGHTLESYLEHLAREGLRRRYGSTPGDGVEARLGHELSIIEKMGFAGYFLVVWDFIRYAREQGIAVGPGRGSSAGSLVAYCLGITNIDPLRYGLLFERFLNPERISMPDMDIDFADDRRDEVIRYVADRYGRDRVAHIITFGTLGAKAAIRDVGRVLGMTYADVDRIAKLVPAFPLNITLEEAYQKSPPLAEMVRTQGNVRELWEVARTLEGCTRHASVHASAVVIADEPLDEYIPLYKDPKRPELITGYAMGPIEKLGLLKMDFLGLRTLTVLANTVRLIHQSREIEIDLDALPLDDAKTYLMLSEAKTFGVFQLESAGMRDALRGLRPSSLEDVIAMVSLYRPGPMELIPDFINRKHGRAKIAYEHPAMEKFTRETYGIMVYQEQIMQIASEMAGFTMGEADMLRRAMGKKDRDLMAQQRDKFIAGCRERGTPAAKAEHVWELMEKFAGYGFNKSHAAAYALVAYQTAYFKATYPVEFMAALLTSEMGDTDKIVKYIEECRAMGIRVDPPDVNVSTVKFSVCGDAIRFGLAAIKNVGEAAMESILATRDEAGPFKSLQDFCARVDLRLVNRRVLDSLIKAGAFDSLGLPRAHLMASADIALEAGQRQQRERAEGQASFFDLLPSAPARPPDEAVGPVPEWDADQRLAFEKEVLGFYVSGHPLARYQPLVESLGITRSGELVAKSPGSRVLLFGQVVALKETSTKSGNRMAFLTLEDMDGTVEVTIFPEPFKAAAESLHASEPLLIRGRVDDSDKGRVVLAEDVRPLERALANGPAMAATGEPTTLRVRIGVREDPQALLAAVRQLCAEHPGRVPVFVHLLLPSQEVVVRSHGLAVDPSPDLLAKLGALLGPTAAIVEHAGSA*