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13_1_20cm_3_scaffold_1643_9

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(7388..7975)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigK n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCY7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 205.0
  • Bit_score: 259
  • Evalue 3.00e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 205.0
  • Bit_score: 259
  • Evalue 4.20e-66
RNA polymerase sigma factor sigK similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 205.0
  • Bit_score: 259
  • Evalue 8.40e-67

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACCTCACGCCACGAACGGCGGCGCGCGCTGGCGCCCGTACCGGACGAGCAGCCCGCTGACCTGCTCAGCCGGGTCGCCCGCGGCGATGAGGCGGCCTTCAGCGCGCTCTACGACGAGCTGGCGCCCCGGGTCTTCGGGCTGTGCCGGCGGATCCTGCGGGATCCCGCCCAGGCCGAGGAGGTGGCGCAGGAGGCGCTGCTGGAGGTGTGGCGCACGGCGAGCCGGTACGACCCGGCGAAGGGCAGCGCGGCGAGCTGGGCGCTGACCATCGCGCACCGGCGCGCCGTCGACCGGGTCCGCTCCGAGCAGGCGAGCACCGCGCGGGAACGCCGGGTGGCGACGGAGGAGGTCCCGTACGACGACGTCGTCGAGGAGGCCACCGCCCGGCTGGAACGCCAGCAGGTGCGCCGTTGCCTCGGCAGCCTCACCGAGCTCCAGCGTGAGGCGATCACCCTGGCCTACTACCAGGGATACAGCTACCGCGAGGTGGCCGAGCGGCTGGACACCGGGCTGCCCACGGTCAAGACGCGGATGCGGGACGGGCTGATCCGCCTGCGCGACTGTCTGGGGGTGGCGGTGGCATGA
PROTEIN sequence
Length: 196
MTSRHERRRALAPVPDEQPADLLSRVARGDEAAFSALYDELAPRVFGLCRRILRDPAQAEEVAQEALLEVWRTASRYDPAKGSAASWALTIAHRRAVDRVRSEQASTARERRVATEEVPYDDVVEEATARLERQQVRRCLGSLTELQREAITLAYYQGYSYREVAERLDTGLPTVKTRMRDGLIRLRDCLGVAVA*