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13_1_20cm_3_scaffold_5093_11

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(11275..12567)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI3_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 424.0
  • Bit_score: 665
  • Evalue 5.20e-188
  • rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH90000.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 424.0
  • Bit_score: 665
  • Evalue 7.20e-188
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 415.0
  • Bit_score: 551
  • Evalue 2.30e-154

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Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1293
GTGGCCGCCGCAGCGGTGAACACCGAGCACCGGATCGAGGACCTGCTGCGTGAGCTGGCGCCGCAGGTCCTCGGCACGCTGGTGCGCCGGAACGGGCAGTTCGACGCGTGCGAGGACGCCGTACAGGAGGCGCTGCTCGCCGCGGCCCGGCAGTGGCCGGCCGACGGGGTGCCGGACCGGCCGCGGTCCTGGCTGCTGACCGTGGCCCACCGGTCACTGGTCGACCGGTGGCGCGCCGACAGCGCGCGGCGCCACCGCGAGCAGGCCGCGGCGGCGCTGGAACCGGCCTTCCGCGCGCCCACCGCCGACCCCCGCGACGCCGACCACGGGCCGGCCGACACCGACGACACCCTTGTGCTGCTGTTCCTGTGCTGCCACCCCGCGCTGTCACCCCCGTCGCAACTGGCACTGACGCTGCGGGCCGTCGGCGGTCTGACCACCGCCGAGATCGCGGCGGCGTTCCTGGTTCCCGAGGCCACGATGGCCAAGCGGATCACCCGCGCCAAACAGGCCATCATCGGCGCGGGCGCCCGCTTCGAGCTGCCGGCGCAGCCGCAGCGGATGGAGCGGCTGGGCGTGGTCCTGCACGTGCTGTACCTCGTCTTCAACGAGGGATACACCACCAGCTCCGGGCCGACCCTGCACCGGGGCGACCTGACCGCCGAGGCCATCCGGCTCACCCGGCTGCTGCACCGGCTGCTGCCCGGCGAGGGCGAGGTCGCCGGGCTGCTCGCGCTGATGCTGCTCACAGACGCCCGCCGGGCCGCCAGAACCGACCCGGGCGGGTCGATCGTGCCGCTGGCCGAGCAACGCCGCGAACTCTGGGACGCCGCTGCGATCGCCGAAGGCCAGGCGATCCTCACCGGGAGCCTGGGGACCGGCCCGATCGGGCCCTACCAGCTGCAGGCGGCGATCGCCGCGGTACATGACGAGGCCCCAAGGGCGGAGGAGACCGACTGGCCGCAGATCCTCGCCCTGTACGACGTACTCGCCCAGGTGGCGCCCGGACCCGTGGTCACCCTCAGCCGCGCGGTCGCCCTGGCCAACGTCCATGGACCCAGGGCCGGGCTCGCCCTACTCGGCACCCTCGACACCGACGACCGGATGACCCACACGCACCGCCTCGAAGCCGTCCGGGCGCACCTGCTCGAACAAGCCGGCGACACCACTGCGGCCCGCGAGTCGTACCTGCGGGCGGCGCGGATGACGGCGAGCCTGCCCGAGCAGCGCTACCTGGAGCTGCGCGCCGCCCGGTTGCACCAGCTCACCCCGCCCGTGGATCCGGCCACCTGA
PROTEIN sequence
Length: 431
VAAAAVNTEHRIEDLLRELAPQVLGTLVRRNGQFDACEDAVQEALLAAARQWPADGVPDRPRSWLLTVAHRSLVDRWRADSARRHREQAAAALEPAFRAPTADPRDADHGPADTDDTLVLLFLCCHPALSPPSQLALTLRAVGGLTTAEIAAAFLVPEATMAKRITRAKQAIIGAGARFELPAQPQRMERLGVVLHVLYLVFNEGYTTSSGPTLHRGDLTAEAIRLTRLLHRLLPGEGEVAGLLALMLLTDARRAARTDPGGSIVPLAEQRRELWDAAAIAEGQAILTGSLGTGPIGPYQLQAAIAAVHDEAPRAEETDWPQILALYDVLAQVAPGPVVTLSRAVALANVHGPRAGLALLGTLDTDDRMTHTHRLEAVRAHLLEQAGDTTAARESYLRAARMTASLPEQRYLELRAARLHQLTPPVDPAT*