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13_1_20cm_3_scaffold_6263_12

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: 10398..14612

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleB UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 999.99
  • Bit_score: 1987
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=RPOC_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 999.99
  • Bit_score: 1983
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 999.99
  • Bit_score: 1983
  • Evalue 0.0

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4215
ATGAATGAGTTGATGAACATCTTCGGGCAGGTTTCGGGGCCGCAAAGCTTCGACCAGATCCGGATCTCGATCGCCAGCCCGGAGCGCATCCGCTCCTGGTCCTACGGCGAGATCAAGAAGCCCGAGACGATCAACTATCGCACCTTCAAGCCGGAGCGGGACGGGTTGTTCTGCGCCCGCATCTTCGGGCCGATCAAGGATTACGAGTGCTTGTGCGGCAAGTACAAGCGGATGAAGTACCGCGGCATCATCTGTGAGAAGTGCGGCGTCGAGGTCACCTTGTCGAAGGTGCGCCGCGACCGCATGGGCCATATCGAGCTCGCCTCGCCGGTGGCGCATATCTGGTTTCTGAAGTCGCTGCCGAGCCGCATCGGGCTGTTGCTCGACATGACTCTGAAGGATCTCGAAAAGGTTCTCTACTTCGAGAGCTACGTCGTGATCGAGCCGGGCTTGACGCCGCTCAAGCTGCATCAGCTGCTCAACGAGGAAGAATATCTGAAGGCGCAGGACGATTACGGCGACGACCAGTTCACCGCCGCGATCGGCGCCGAGGCCCTCCGCGTCATGCTGTCGGCGATCGACTGCCAGGAGGAAAAGGTCCGGCTGCGCGAAGAGTTGCGCGATACGACCTCAGAGGCGCGCCGCAAAAAGCTCGTCAAGCGGCTGAAGCTCGTCGAGGCGTTCGTCGAGTCGCATAGCCGGCCGGAATGGATGATCCTCGAAGTCGTGCCGGTCATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGATGGCGGCCGCTTCGCGACCTCCGACCTCAACGACCTCTATCGCCGCGTCATCAACCGCAACAATCGGCTGAAGCGCCTGATCGAGCTGCGCGCGCCCGACATCATCGTGCGCAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGATAACGGCCGCCGCGGCCGGGTAATCACCGGCGCCAACAAACGGCCGCTGAAGTCGCTATCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTCTTGGGCAAGCGCGTCGACTATTCGGGCCGCTCGGTCATCGTCGTCGGCCCGGAATTGAAGCTGCATCAATGCGGCCTGCCGAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTACTCAAAGCTCGAGCTCTATGGCCTCGCCAGCACGATCAAGGCGGCCAAGCGCATGGTCGAGAAGGAGCGGCCGGAGGTCTGGGACATCCTCGAGGAGGTGATCCGCGAACATCCGGTGTTGCTGAACCGCGCCCCGACGCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCACCGCCTTCAATGCGGATTTCGACGGCGACCAGATGGCGGTGCATGTGCCGCTGTCGCTGGAAGCGCAGCTCGAAGCGCGCGTCCTGATGATGTCGACAAACAACATCCTGAGCCCGGCGAACGGCAAGCCGATCATCGTGCCGTCGCAGGACATCGTTCTCGGCCTCTATCACATTACGATGGAGCGCCCGGACATAGCGGGATTGGCATTGCCGCTCGGCGGCTTTGCCCGCGGCGATCAGCACGACGTCATCGGTGGGATGCAGAAGGCGATCAAGGCCGGAACCGCGTTTCTCTATGCGCCTGGCGAGAAGCCATCGCGCCTCGCTCGCGAATTGGGCAAGGCCGACTCTCCTGTGGTGGATCGGCTCCTCAAAGGCGAAATCGCGGTCCATCCCCGGATGAACTGGCCGGAATTCGGCACTCAGAAGGGCGCAGCCGCGGCGCGCGACGCGTTCCAGCAAAGCCTGGAGCGGCGCGACATCACGATCTTCAACCTCGAAGATCCGGAGACGCCTTTTGTCTGGAAGAAGCTCGAGGATTTGAAGCGCGCCGTTGACGACGAGCGCGTCGTTCTGGTGCCGGTGCCAGGGTTTACGAGCATTGGCGATATCGAGCAGGCCTTGGCGGCGAAAACCGTTTCACTCCATACCCGCATCAAGGCCCGTTATCAGACGGTCGATGCTGACGGCCACCCGATCGTGCGTCGCGTCGATACAACGCCGGGACGCATGCTGCTGTCCGAGATCCTGCCGCGGAACCCGAATGTCAGCTTCGATCTGATCAACCAGCTGCTCACCAAGAAGCAGATCAGCGATCTGATCGACCAGGTCTATCGCCATTGCGGGCAGAAGGAGACGGTCATCTTCTGCGACCGACTGATGACGCTCGGCTTCCAGCAAGCGTGCAAGGCCGGCATCTCTTTCGGCAAGGACGATCTGATCATCCCCGAGGCGAAGCATCGCCTCGTGGCCGATGTGCAGGAGAAGGTCAAGGAATACGAGCAGCAGTACCAGGACGGGCTCATCACTCAGCGCGAGAAATACAACAAGGAGGTCGATGCCTGGACCAGCTGCTCGGAGCGGGTTGCCGAGGAGATGATCAAGGTCATCCGCGCGCAGCGGCCCGGCGAGCCGATCAACTCGGTCTGGATGATGTCTGACTCGGGTGCCCGCGGCTCGGTGGCGCAGATCAAGCAGCTGGCCGGCATGCGCGGCCTGATGACAAAGCCCTCGGGCGAGATCATCGCGACGCCGATCATCTCGAACTTTAAGGAAGGGTTGACCGTGCTCGAGTACTTCAACTCGACGCATGGCGCGCGCAAGGGTCTCGCGGATACCGCACTGAAGACAGCCAATTCCGGCTATCTGACGCGCCGGCTGGTCGACGTCGCGCAGGACGCGATCATCACCGAAGAGGATTGCGGCACGACCCGCGGCCTCTTGACCCGCGCCGTCGTCGATGGCGGCGAGATCATCGCGACGCTCGCCGACCGCATTATCGGCCGCTGCGCCGCGGTCGACGTGCTCGATCCGTTGAGCGGCGAGGTGGTGCTCAAGGCCGCAGAGCTGATCGACGAGGACGCAATCGACGCGATCGAGCGCGCCGGCATTGACGCCGTGTCGATCCGTTCGGTCTTGACCTGCGAGGCGGCCACGGGGGTCTGCGGCAAATGCTATGGCCGTGACCTGGCCCGCGGCACGATGGTGAATATGGGCGAGGCGGTTGGCGTCATCGCGGCGCAATCCATCGGCGAACCCGGCACACAGCTGACGATGCGGACTTTCCACATCGGCGGCGCGGCGCAGCGTGGCGCCGAGCAATCCTCGATCGAGGCGGCGTTCGACGCGACGATCGAGGTCAAGAACCGCAACGTCGTCATCAACTCGACGGGGCTGCCTGTCGCTATGGGCCGCAAGCGCGGCGACCGTATCGCCGAGTGGGACCCGTACACGATCCCGATCATCACCGAGAAGGACGGCGTCGCGCATTACGTCGATCTGATCGAGGGCGTCTCGATGCGCGAGGTGCTCGACGAGGCGACCGGCATCTCTTCAAAGGTGGTCATCGATTGGAAGCAGCAGCCGCGCGGCGGCGACCTGCGCCCGCGCATCACCCTGCGCGACGCAAAGGGCGAGGTGCTGACCTTGGCGAACGGTCTCGAGGCGCGCTACTTCCTGCCGGTCGACGCGATCCTGTCGGTCGATGGCGGGGCGCACGTCAAGGCCGGCGATGTGCTCGCCCGGATGCCGCGGGAATCCTCGAAGACGCGCGACATCACCGGCGGTCTACCCCGTGTCGCCGAGCTGTTCGAAGCGCGCAAGCCGAAGGATTTCGCGATTATCAGCGAGAGCGAAGGCCGCGTCGAATTCGGCAAGGATTACAAGACCAAGCGGCGCATCGTCGTGGTGCCGAACGAGGGCTCCGGCGAGTCGGTCGAGTACCTGATCCCCAAGGGCAAACACATCAGCGTGCAGGAGGGTGATTACGTCCTGAAGGGCGACCTGATGTTGGACGGCAACCGCGTGCCGCACGACATCCTGCGCATCCTTGGGGTCGAGGAGCTCGCGAGCTACCTGATCAACGAGATCCAGGAGGTCTACCGATTGCAGGGCGTGCGCATTAATGACAAGCACATCGAAGTCATCGTGCGCCAGATGCTGCAGAAGGTAGAGATCGACGATCCCGGCGAGACGACCTTCCTCGCCGGCGAGCAGATCGACCGCTCCGAGTTCGACCGCGAGAACGCCAAGGTCGAAGCGGAAGGGCTGCGGCCGGCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGACAACCTGCAGGGGTTGA
PROTEIN sequence
Length: 1405
MNELMNIFGQVSGPQSFDQIRISIASPERIRSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLSKVRRDRMGHIELASPVAHIWFLKSLPSRIGLLLDMTLKDLEKVLYFESYVVIEPGLTPLKLHQLLNEEEYLKAQDDYGDDQFTAAIGAEALRVMLSAIDCQEEKVRLREELRDTTSEARRKKLVKRLKLVEAFVESHSRPEWMILEVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSKLELYGLASTIKAAKRMVEKERPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGLYHITMERPDIAGLALPLGGFARGDQHDVIGGMQKAIKAGTAFLYAPGEKPSRLARELGKADSPVVDRLLKGEIAVHPRMNWPEFGTQKGAAAARDAFQQSLERRDITIFNLEDPETPFVWKKLEDLKRAVDDERVVLVPVPGFTSIGDIEQALAAKTVSLHTRIKARYQTVDADGHPIVRRVDTTPGRMLLSEILPRNPNVSFDLINQLLTKKQISDLIDQVYRHCGQKETVIFCDRLMTLGFQQACKAGISFGKDDLIIPEAKHRLVADVQEKVKEYEQQYQDGLITQREKYNKEVDAWTSCSERVAEEMIKVIRAQRPGEPINSVWMMSDSGARGSVAQIKQLAGMRGLMTKPSGEIIATPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDAIITEEDCGTTRGLLTRAVVDGGEIIATLADRIIGRCAAVDVLDPLSGEVVLKAAELIDEDAIDAIERAGIDAVSIRSVLTCEAATGVCGKCYGRDLARGTMVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSSIEAAFDATIEVKNRNVVINSTGLPVAMGRKRGDRIAEWDPYTIPIITEKDGVAHYVDLIEGVSMREVLDEATGISSKVVIDWKQQPRGGDLRPRITLRDAKGEVLTLANGLEARYFLPVDAILSVDGGAHVKAGDVLARMPRESSKTRDITGGLPRVAELFEARKPKDFAIISESEGRVEFGKDYKTKRRIVVVPNEGSGESVEYLIPKGKHISVQEGDYVLKGDLMLDGNRVPHDILRILGVEELASYLINEIQEVYRLQGVRINDKHIEVIVRQMLQKVEIDDPGETTFLAGEQIDRSEFDRENAKVEAEGLRPAXXXXXXXXXXXXXXXXSTTCRG*