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13_1_20cm_4_scaffold_10982_2

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(429..773)

Top 3 Functional Annotations

Value Algorithm Source
two component sigma-54 specific Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 117
  • Evalue 1.10e-23
Two component, sigma54 specific, Fis family transcriptional regulator id=4040234 bin=GWA2_Methylomirabilis_73_35 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 79.0
  • Bit_score: 116
  • Evalue 1.40e-23
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG) similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 80.0
  • Bit_score: 77
  • Evalue 3.40e-12

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGAGCAGATCAAAGCCGAGAAGGATGGTCTCGACGTCGGGGCGGACCTGCCGCGCTCGGACCTTCCCCTGCCGGGAGTCTCGCGGCTGATCGCCGACGCGATCCCGCGCCTCGTCGACCAGCTGGCGGCCGCCCAGCCCGGCCGCATTCATCGCGAGGCGCTCGAGCTGCTGGAGCGGCCGCTCCTGGCGCACGTGCTCGCGTTGACGGGCGGCAACCAGTTGCGCGCCGCCCGGCTGCTCGGGCTCAACCGCAACACGCTCCGCAAGCGCTGCCGCGAGCTCGGGCTCGCGTTGCCGCGCGCGGCGCGCGGAGGGGCTGCGCCGAAGCCCGCGTCGCTCTAA
PROTEIN sequence
Length: 115
MEQIKAEKDGLDVGADLPRSDLPLPGVSRLIADAIPRLVDQLAAAQPGRIHREALELLERPLLAHVLALTGGNQLRAARLLGLNRNTLRKRCRELGLALPRAARGGAAPKPASL*