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13_1_20cm_4_scaffold_242_30

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(24294..25019)

Top 3 Functional Annotations

Value Algorithm Source
lptB; ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 238.0
  • Bit_score: 362
  • Evalue 4.30e-97
ABC transporter ATP-binding protein id=4387959 bin=GWC2_Methylomirabilis_70_24 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 234.0
  • Bit_score: 277
  • Evalue 1.30e-71
livG; branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 236.0
  • Bit_score: 255
  • Evalue 1.10e-65

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGCTGACGCTTGAGCGCGTGACGAAGCGCTTCGGGGGCCTCACGGCGGTGCGCGACGTGAGTCTCGACGTCCGCCGGGGCGACCTTCTCGGCATCATCGGGCCGAACGGCGCCGGCAAGACGACACTCTTCAATGTCATCGCTGGCTACTACCGTCCCGACGGCGGCCGCGTCGTGTTCGACGGCCGGGACGTGGGGGGCCGGCCTCCGCACGTGATCTGCCGCCTCGGTCTCACGCGGACGTTCCAGCTCGTGAAGCCCTTCGGCAACCTCTCGGTCGTGGACAACGTGATGATCGGCGCGCTGACCAGGCTCCGGCGCGTGAGCGCGGCGCGCCTCGAGGCCGAGCGCGTCGTCGAGACGTGCGGGCTCGCCCCGCACGCCCACGCGCGCGCCAGGGCGCTGCCGATCGGCCTCCGCAAGCGCCTCGAGGTCGCGCGGGCGCTCGCCACGCGACCGCGCCTCCTCCTCCTCGACGAGGTGATGGCGGGCCTCACCCCGTCCGAGCTCACGGGGATCATCGAGCTGATCCGGCTCCTGCACGCCGACGGCCTCACACTGATCGTGATCGAGCACGTCATGGCGGCGATGATGCGCCTCGCCCAGCGCCTCGTCGTGCTCCACCACGGCGAGGCGATCGCGGAAGGCACACCGGCCCAAGTCGCGCGGGATCGCCGCGTCATCGACGCCTACCTCGGCGACGAATTCGTCCTTGCTCAGGCTTGA
PROTEIN sequence
Length: 242
VLTLERVTKRFGGLTAVRDVSLDVRRGDLLGIIGPNGAGKTTLFNVIAGYYRPDGGRVVFDGRDVGGRPPHVICRLGLTRTFQLVKPFGNLSVVDNVMIGALTRLRRVSAARLEAERVVETCGLAPHAHARARALPIGLRKRLEVARALATRPRLLLLDEVMAGLTPSELTGIIELIRLLHADGLTLIVIEHVMAAMMRLAQRLVVLHHGEAIAEGTPAQVARDRRVIDAYLGDEFVLAQA*