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13_1_20cm_4_scaffold_575_24

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 22379..23011

Top 3 Functional Annotations

Value Algorithm Source
sigW1; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 175.0
  • Bit_score: 257
  • Evalue 1.30e-65
ECF subfamily RNA polymerase sigma factor id=4878370 bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 174.0
  • Bit_score: 257
  • Evalue 1.60e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 191.0
  • Bit_score: 156
  • Evalue 8.20e-36

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGGCCGGACCGATCCACGCGACGATCGAATTTAGGTCGGTGGGGAACCCGGCGCGGGCGGTATGGTCTAACCTGATGGACAGGAGGACCAGTGATGACTCCCACCTGGTGGACCGGCTCCGGCGGGGCGACGCGCGGGCCTTCGACGAGCTCGTGACCGCGTACCAGCACCGGGTCTTCTCGGTGGCCCTCAGGATGCTGCGCAACCGGACCGAGGCGGAGGAGGTCGCGCAGGAGGTGTTCCTACGAGTGTACCGGACCGTCGCCGCGTTCCGGGGCGACGCGAAGCTCTCGACCTGGCTCTACGCGATCGCGTCGCGTCTGTGTCTCAATCGCCTGGCGTCAAGCGACCGGCGGGTGACGCGGGAGGGCGACGAGACGCTGACGCGCCTCGCGAGCGGCGACGCCACCCCTGTCGACGAGCTGGAGCGAAGCGAGCTGGAGGCGACGCTGCACCGCGCGATCGCCGAGCTCCCAGAGGAGCGGCGGATCGTGGTCGTGCTCCGTGACCTCGAGGGCCTCTCGTACGAGGAGATCGCGGCGGCGCTCGACCTGGAGCTCGGCACGGTGAGGTCGAGACTCCACCGCGCCCGGATGGACCTCAAGGAGAAGCTGGAGCGGTTCCTGCCATGA
PROTEIN sequence
Length: 211
VAGPIHATIEFRSVGNPARAVWSNLMDRRTSDDSHLVDRLRRGDARAFDELVTAYQHRVFSVALRMLRNRTEAEEVAQEVFLRVYRTVAAFRGDAKLSTWLYAIASRLCLNRLASSDRRVTREGDETLTRLASGDATPVDELERSELEATLHRAIAELPEERRIVVVLRDLEGLSYEEIAAALDLELGTVRSRLHRARMDLKEKLERFLP*