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13_1_20cm_4_scaffold_1142_14

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 10635..11261

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 202.0
  • Bit_score: 223
  • Evalue 2.50e-55
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 203.0
  • Bit_score: 236
  • Evalue 3.10e-59
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 202.0
  • Bit_score: 223
  • Evalue 7.10e-56

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGGTGGAAGAACGGCTCTCCCGTGAGGACGCGGAGCTCGTCGCGGGACTGCGCGCAGGTGATGAGGCGGCGTTCCGCGCGCTGCTGCAGCAGTACGGCCCCGGGCTGCTCAGGGTCGCGCAGATGTACGTCTCGAGTCGAGCAGCGGCGGAGGACGTCGTCCAGGAGGCGTGGGTCGGCGTCCTACGCGGGATCGACCGGTTCGAGGGCCGGTCCTCGCTCAAGACGTGGCTCTTTCGCATCGTCGTCAACACGGCCAAGACCCGCGGGGTGCGCGATGCGCGAAGCGTTCCCTTCTCGAGTGTCGAGGACGAGGGTGGGACGGTCCCACCGGACCGCTTCTTTGCCGAGTCGGAGCGCTTCCCCGGGCATTGGTCGGTGCCTCCGTCGAGCTGGGCGGGCGTTCCCGACGAGCGCCTCGTTGCCGACGAGACGCTCGCCGTCGTCCGGCGGGCGATCGGCCGTCTTCCCGAGGCTCAGCGGACGGTGATCACGCTGCGTGACGTCGACGGCTTCGACGCGGACGAAGTTTGTAACGCCCTCGACTTGACGGAGACGAATCAGCGCGTTCTGCTCCACCGGGCACGTGCCAGGGTGCGAGCAGCACTCGAGGAGTATCTGGGATGA
PROTEIN sequence
Length: 209
VVEERLSREDAELVAGLRAGDEAAFRALLQQYGPGLLRVAQMYVSSRAAAEDVVQEAWVGVLRGIDRFEGRSSLKTWLFRIVVNTAKTRGVRDARSVPFSSVEDEGGTVPPDRFFAESERFPGHWSVPPSSWAGVPDERLVADETLAVVRRAIGRLPEAQRTVITLRDVDGFDADEVCNALDLTETNQRVLLHRARARVRAALEEYLG*