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13_1_20cm_4_scaffold_223_26

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(23235..23516)

Top 3 Functional Annotations

Value Algorithm Source
nucleoid protein Hbs; K03530 DNA-binding protein HU-beta Tax=RBG_16_Acidobacteria_64_8_curated UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 91.0
  • Bit_score: 105
  • Evalue 4.80e-20
hupA; transcriptional dual regulator HU-alpha; K03530 DNA-binding protein HU-beta id=5096515 bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 91.0
  • Bit_score: 101
  • Evalue 5.00e-19
nucleoid DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 90.0
  • Bit_score: 95
  • Evalue 7.60e-18

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Taxonomy

RBG_16_Acidobacteria_64_8_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 282
TTGACCAAACAGGAGTTCGTCAACGAGGTCGCCAACAAGTCGGGCCTCTCGAGCCGTGATGCGGCGAGGGCCGTGGACGCCTTCCTCGACGCGATCACCGACACACTGCGGGGCGGCGGCGAAGTCGCGTTCACCGGCTTCGGGAAGTTCACCACGCAGCGGCGCGCCGAGCGGCAAGGCGTGAATCCGCGCAACCCGTCGCAGAAAGTGACGATCCCGGCTGCCACGGTGCCGAAGTTCAGCGCAGGGAGTCAGTTGAAGCAGGCCGTCAAGGGCGGCTAG
PROTEIN sequence
Length: 94
LTKQEFVNEVANKSGLSSRDAARAVDAFLDAITDTLRGGGEVAFTGFGKFTTQRRAERQGVNPRNPSQKVTIPAATVPKFSAGSQLKQAVKGG*