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13_1_20cm_4_scaffold_48_15

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 13037..14188

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 385.0
  • Bit_score: 490
  • Evalue 2.80e-135
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 399.0
  • Bit_score: 469
  • Evalue 3.70e-129
  • rbh
rpoE; RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 389.0
  • Bit_score: 452
  • Evalue 1.30e-124

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
GTGGCGATCCTCATCCGCGTCCTCGGTGACTTCGAGCTCGCCGAGGACGCGGTGCAGGATGCGTTCACGACCGCGCTCGAACGCTGGCCGCGCGACGGCACTCCGCGCAATCCGGGCGCCTGGATCGTTGCCACGGCGCGCAACCGTGCGATCGACCGGATCCGGCGCGAGCGCACGCTCGCACGCAAGACGGAGCTGCTCGCCCGGCTCGAGGCGCTCCCCACCAACGAGGAGGACGACGTGAGCTCGATCCCCGACGACCGGCTCAGCCTCGTCTTCACCTGCTGCCACCCGGCACTCGCGACGGACGCGCAGATCGCCTTGACGCTGCGCGAGGTCGCCGGACTACAGACGCAGGAGGTGGCGCGCGCCTTCCTCGTGCCGGAGGCGACCCTCGCGCAGCGACTGGTTCGAGCGAAGCGGAAGATTCGCGACGCCGGCATCCCGTTCCGCGTGCCGCCCGACCACCTGCTGCCGGAGCGCCTGCGCGCCGTGCTGGCCGTCCTCTATCTCGTCTTCAACGAGGGCTATTCGGCGACGAGCGGCGAGGCGCTCACGCGGCGCGACCTCTGCGAGGAGGCAATTCGCCTGGCCAAGCTGCTCGCGGTGTTGATGCCCGACGAGGCCGAGGCGCTGGGCTTGCTCGCGCTGATGCTGCTGCAGGATTCCCGGCGCGACGCACGCACCGGTGGCGACGGGGAGCTCGTCCTGCTCGAGGACCAGGACCGAGAGCTGTGGGACCGCGAGCGCATCGACGAAGGGCTCCGCGTGCTCGACCGGGCACTCGCGCTGGGCTCGCCCGGCGCTTACCAGCTGCAGGCCGCGATCGCCGCGCTGCACACGGAGCCGGAGACCGACTGGGCGCAGATCGCGGCGCTCTACGGGCAGCTCGCCCGGCAGACGGGGTCGCCGGTCGTCGAGCTGAATCGCGCGGTCGCCGTCGCGATGGCCGACGGCCCCGAGCACGGGCTCGCGCTGATGCGCGATCTACACCTGGACGAGTACCACCTGTATCACGCCGCGCGAGCCGATCTCCTGCGCCGCCTCGCGCGCATCGACGAAGCCGCGGACGCATACCGGCGCGCACTCGAGCTTGCCCGGACGGAGCCCGAGCGCCGCTTCCTCGCCCGCCGGCTGGCCGAAATCTCGTAG
PROTEIN sequence
Length: 384
VAILIRVLGDFELAEDAVQDAFTTALERWPRDGTPRNPGAWIVATARNRAIDRIRRERTLARKTELLARLEALPTNEEDDVSSIPDDRLSLVFTCCHPALATDAQIALTLREVAGLQTQEVARAFLVPEATLAQRLVRAKRKIRDAGIPFRVPPDHLLPERLRAVLAVLYLVFNEGYSATSGEALTRRDLCEEAIRLAKLLAVLMPDEAEALGLLALMLLQDSRRDARTGGDGELVLLEDQDRELWDRERIDEGLRVLDRALALGSPGAYQLQAAIAALHTEPETDWAQIAALYGQLARQTGSPVVELNRAVAVAMADGPEHGLALMRDLHLDEYHLYHAARADLLRRLARIDEAADAYRRALELARTEPERRFLARRLAEIS*